Poecilia reticulata (guppy): 103459480
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Entry
103459480 CDS
T05149
Symbol
cald1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103459480 (cald1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pret04812
]
103459480 (cald1)
Cytoskeleton proteins [BR:
pret04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
103459480 (cald1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
103459480
NCBI-ProteinID:
XP_008399280
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All DBs
Position
LG23:complement(9975491..10109942)
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AA seq
581 aa
AA seq
DB search
MEDMDFERRRELRRQKREEMRLEAERMLRNDDDEEEAARERRRRARQERLRNRESEEPSS
QPDGTIMTNSHSVTESVSVSSSYGGGGDDEEQALQERMAKREERRQRRMKEALERQKQLE
PAGDGVGPEKNSTEEERPSRRSRRYRDTVEDEEKTESSSSRREVREQEEPREEEEEPAPE
REEEEEEEEKVEVVEPKPRRSNLREQASAEETVMQHKDLIEDETHSVVSESSSQAKSANS
EAEEDSVASGEAEEVNEREESEEDQRKHNGGLHDEAAPKQHRKPERTLSRGSVRSPEVSA
SDEQDDDARLEAERKLEELKRRRDDAESEEFERMRQKQQEAEAELEELKRKREERRKVLE
EEERQRKQEEAERKAREEEEKRKMKEEIERRRAEAAEKRQKVDDTVDGEGKPFKCFSPRG
SSLKIGERAEFLNKSAQKSSVKASHSPVVSKIDNRLEQYTSAAQRENKESKSPRSTVLDL
PMVTDVRNIKSMWEKGNVFSSPGGAGSTFKEAAVIKTGVAGRINDWLNKTPESGKTSGGR
PTDLKPVDVTNKRSLWENKGATPTKMAGRGETKSVANGMGH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatggactttgagcggcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaggctgaacgcatgctcaggaacgatgacgacgaggaggaggcggcccgggag
aggaggcgcagggcgcgtcaggagaggctgaggaaccgggagagcgaggagcccagcagc
cagccggacggcaccatcatgaccaacagccacagcgtgacagagtccgtctctgtgagc
agctcctacggcggcggcggggacgacgaggagcaggccttgcaggagcgcatggccaag
cgcgaggagaggcggcaaaggcgcatgaaggaggcgctggagaggcagaagcagctggaa
cccgccggcgacggcgtcggcccggagaagaacagcacagaggaggaacggccctcccgg
cgcagccgccgttaccgtgacaccgtggaggacgaggagaagactgagagtagcagctcg
aggcgggaggtgagagagcaagaggaacctagagaggaggaagaggagcctgctcctgag
agagaggaagaggaggaagaggaggagaaagttgaagttgtggaacccaaaccaagaagg
tctaatctgagagaacaggcatcagcagaggagactgtaatgcaacacaaggatctcatt
gaagacgaaacccattcggtagtcagtgagagttcaagtcaggccaagtcagcaaactcc
gaggctgaggaggattcagtagcatcaggggaggctgaagaggtgaacgagagggaagag
tctgaggaggatcagaggaaacataacggaggactgcatgatgaggcggctcccaaacag
cacaggaaacccgagaggaccctcagccgtggcagcgtccgttcccccgaggtgtccgcc
agcgacgagcaggacgacgacgcccgcctggaggcagagcggaagctggaggagctgaag
cgccggcgcgatgacgccgagagcgaggagttcgagaggatgaggcagaagcagcaggag
gccgaagccgagctggaggagctgaagaggaagcgggaagagaggaggaaggtgctggag
gaggaggagaggcagcggaagcaggaggaggccgaacggaaagccagagaggaggaggag
aagaggaagatgaaagaggagattgaaaggagacgggccgaggctgcggaaaagaggcag
aaggtggacgacaccgtggacggggaagggaaaccgttcaagtgcttcagtcctcgaggc
tcttctctcaagattggagaaagagcagaattcctgaacaagtcggcacagaaaagctct
gtgaaggcgtctcattctcctgtggtgtccaagatagacaaccggctggagcagtacacc
tcagctgctcagcgagagaacaaggagtccaaatcccctcgctccaccgtgttggatctt
cccatggtcactgacgtacgaaacattaagagcatgtgggagaaaggcaacgtgttcagt
tcacctggaggtgctggaagcacttttaaggaagcagctgttataaagacgggcgtggcg
ggccgcatcaacgactggctgaataaaaccccagagagcggcaagacgtcaggaggaagg
ccaacggacctgaaacccgttgatgtcaccaacaagaggagtctatgggaaaacaaaggc
gccactccaacaaagatggcaggcagaggagagaccaaatcagtcgctaacggtatggga
cactaa
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