Poecilia reticulata (guppy): 103459505
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Entry
103459505 CDS
T05149
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pret01001
]
103459505
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103459505
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103459505
Protein kinases [BR:
pret01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
103459505
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103459505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_2
PHD-1st_NSD
PML_CC
FemAB_like
PRANC
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
103459505
NCBI-ProteinID:
XP_008399337
UniProt:
A0A3P9NUV4
LinkDB
All DBs
Position
LG23:9584953..9598293
Genome browser
AA seq
1042 aa
AA seq
DB search
MDESADNDDLVIIVENEAESLPAGEEKVKQLGAFGLMDTCPICKLSFHNREPKLLPCLHS
FCRRCLPPPLRSAEPRRDPHGPVGSIRCPVCGQECWEVDVLDNFFVKDSAEVPSSTVEKT
SQVCMSCDDNTEATGYCVECVEFLCLTCIEAHQRVKFTRDHTIRQKEEMSPEALGVSTQK
PVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHKQYLETMTLQLQE
KRKAIEEVSSCINSGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILINQLEALTKDHD
LALKKQQDDINALTRQLDHVISFTKWATASHSGTALLYCKRLILYQIHYLMRTSYNPSIV
PQSSVRFQCRSGFWASNVDLGSLVVERCPGRPPIPNHQQGPRPEAPTGGLSLAAAQQRQS
TLAQLQMQVDKLSHHPQRQPPPNHWSWYQNVRLSAPPGPPPPTRPIHGGSSPSQAPPGLV
QPGRRFGNSHPNPRSPPASMIQSPGYGASQSLRELIHSNTFPPKPIDISQGAPRFPQPLS
APQVALHQRCMPESSLLKRSEAGLPVPTVSISIPKPTMGLGLAAGSSEKSSSSFGHVTGH
GGQNSPLAKPSSSDRTAGSMSWRSAPPSAPAPKRRRRMSPGPVIVIKDEPEDEDEVRFVQ
SSGGSSLPDSSTGAQSKPRPPPKGLVASTALASTSVDQCNQTQLQPDPEKKPEPEDDPNE
DWCAVCQNGGELLCCDKCPKVFHLSCHIPALNESPSGEWFCSFCRDTESPEMEYDCDRGS
GPGSEHFPSVDKRKCERLLLRLFSNDFSTDFQHPASPSETRRYKELIKTPMDLTMVKKKL
QSKEDECYGNPEEFVSDVRLIFFNCAKYYKATSEIGSAGLYLEDYFEEQLKLAYPDKVFP
GGREEQMIPPLEDEIEEEEEQPMEQSAAAAEDKKPQSPAGDGDGGMVPKEEPMAPAESEN
LEESSEMTQKETEEATADVEGGVPPAEEAKPDESVDGKQAESCPASDTEAKDGGEDEKAQ
LPTDDAEDTPDTSENPASEQQG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtgctgataacgacgacctcgtcatcatcgtggagaacgaggctgaaagt
ttgcccgcaggggaagagaaggtgaaacagttgggagccttcgggctcatggacacatgt
cccatctgcaagctaagtttccacaacagggagcccaaactgctgccgtgtttgcactcc
ttctgccggaggtgcctgcctcccccgttgaggagcgccgagccgaggcgggacccgcac
ggtccagttggttccattcggtgtccggtgtgcggacaggaatgctgggaggtcgacgtg
ttggacaacttctttgtcaaggactctgccgaggtgcccagcagcacagtggagaaaacc
agccaggtgtgcatgagctgtgacgacaacaccgaggcgacgggctactgcgtggagtgc
gtggagttcctgtgcttgacatgcatcgaggcgcaccagagggtgaagttcacccgagac
cacaccatacgccagaaggaggagatgtctccagaggctctgggcgtttccacgcagaag
cccgtcttctgcgacgtccacaagcaggagccgctgaagctgttctgcgagacgtgcgac
cggctcacgtgtcgagactgccagctcctcaaacacaaggaccacaactaccagttcttg
gaggatgcgtacaggaaccataagcagtatctggaaaccatgacgctgcagttgcaagaa
aagagaaaagccattgaagaagtgtcgagctgtatcaactccggactgcagcaagtggag
gaaaaccggaaagctgtgacgaacgaaataaagaagtccatctgtaacctgatcatggag
atcaacaggaagggaaagatcctgataaaccagctcgaggcgctgactaaggaccacgat
ttggctctgaagaagcagcaggacgacatcaacgccctgacgaggcagctggatcacgtg
atcagcttcaccaagtgggcgacggcgagtcacagcggaacggctctgctgtactgcaag
agactgatcctctaccagatccactacctgatgagaacgagctacaacccgtccatcgtc
ccgcagagctcggttcgcttccagtgccggtcgggcttctgggcctcaaacgtagacctc
ggttcgctggtggtcgagcgatgtccagggaggccacccatccccaaccatcagcagggt
cccagacccgaggccccgaccgggggtctttccctcgcagcagcacagcagcgacagagc
actctagctcagctccaaatgcaggttgacaagctctcccaccatcctcagaggcagccc
cctcctaaccactggtcctggtatcaaaatgtcaggctctcagctcctccaggccccccc
ccacctaccagacccatccatggggggtcttcaccctcccaagctcctcccggcttggtg
cagcctggacgcaggttcgggaacagccatccaaaccccaggagccctccggcgtccatg
attcagagcccaggctacggagcgtcacagtctctacgagaactaatccacagcaacacg
ttcccccctaaacccatcgacatatcgcagggcgctccccgcttcccgcagcctctgtct
gctccccaggtcgctctgcaccagagatgcatgccggagtcgtccctcctaaagaggagc
gaagcaggtctgcccgtccccaccgtcagcatctccatccccaaacctaccatgggtttg
ggtctggcagctggaagctcagaaaaaagcagcagctcgtttggtcatgtgacaggtcac
ggagggcagaactcgccgctggcgaagccgtcctcttctgacagaacagctgggtcgatg
tcctggaggtcagcgcctccatcggcccccgcgccgaagcggaggaggagaatgtctccg
gggcccgtaatcgtcatcaaggacgaacccgaggacgaggacgaagttcgttttgtgcaa
tccagcggcgggtcgagcctcccggacagcagcaccggcgctcagtcgaagccccggccg
ccgccaaagggactggtggcgtccacggccctggcgtccacctccgtcgaccagtgcaat
cagacccagttgcagcccgacccagaaaagaagccggagccagaggacgaccccaacgag
gactggtgcgccgtgtgtcagaacggcggggagctgctctgctgcgacaagtgccccaaa
gttttccacctctcctgccacattccggctctgaacgagtcgccgagcggtgagtggttt
tgctcgttctgccgggacacagagtcaccagagatggagtacgactgcgacagaggcagc
gggccgggctctgaacacttcccctctgtggacaaaaggaaatgcgagcggctgctgcta
cgcttgttcagtaatgacttcagcacagacttccagcaccctgcgtctccatcggaaact
cggcggtacaaggagctaataaagacaccgatggatttgacgatggtgaagaaaaaactg
cagtcgaaggaggacgagtgctacggaaacccggaggagtttgtttctgacgtcaggctc
atatttttcaactgtgccaagtactacaaggcgacatctgagattgggagtgccgggttg
tacctggaggattacttcgaggagcagctgaagctcgcctacccggacaaggtcttcccc
ggggggagagaggagcagatgatccctcctttagaggacgagatcgaagaagaggaggag
cagccgatggagcaaagcgccgccgcagcggaggacaagaaaccacaaagccctgcagga
gacggagacggcggaatggttcctaaggaagagccgatggctcctgcagagagtgagaac
ctggaggaaagcagcgaaatgactcaaaaagagacggaggaagcgactgcagacgtagag
ggaggcgttcctcctgcagaagaggcgaagccagatgagagcgtcgacggtaagcaggcg
gaaagctgcccagcttctgacacggaagctaaagatggcggcgaggacgagaaggctcag
ctgcctacggatgacgctgaggacacaccggacacttcggagaatccagcctcggagcaa
cagggatag
DBGET
integrated database retrieval system
