KEGG   Poecilia reticulata (guppy): 103460011
Entry
103460011         CDS       T05149                                 
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04382  Cornified envelope formation
pret04510  Focal adhesion
pret04512  ECM-receptor interaction
pret04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103460011
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103460011
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103460011
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103460011
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pret04147]
    103460011
   00536 Glycosaminoglycan binding proteins [BR:pret00536]
    103460011
Exosome [BR:pret04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103460011
Glycosaminoglycan binding proteins [BR:pret00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103460011
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103460011
NCBI-ProteinID: XP_017164741
LinkDB
Position
LG2:complement(27435721..27447173)
AA seq 1126 aa
SPGPNGLHGLPGNPGPLGEGPWGKHGDKGFPGWPGTPGSRGAAGTPGESFVGIRGQHGPP
GDDGLAGYDGVQGTPGSPGGCIPHGAGGQVDVTGDCEPIPGPPGQPGPQGISGISGSPGV
PGPKGFSGAQGVNGEKGEEGERGRGGIPGPRGFPGPRGDLGTPGTKGSSGNPGVPGMPGR
YGSQGXKGAHGEVMGASSGPPGDPGLPGLRGQKGLLGDQGQPGFSGIPGMPGMIGFRGLK
GAPGLPGEEGRSGPAGTYGFPGDPGRSGPPGPAGTTGEPGRTGERGXGGDPGPPGPTGLK
GMPGVXGDDGGIGERGPPGDPGEPGATGRPGLQGLKGTKGSHGTYGFEGVTGNPGLKGFE
GLKGGSGTPGEVGLKGLSGAKGERGEQGLQGKPGVMSPKMLIHIKGTKGEHGHQGNPGFT
GPRGTKGHQGVPGYDGAHGLPGDPSDEKGVHGDPGAQGLPGIKGMPGTPGSRGIQGFDGM
HGNKGGKGSPGAYGHTGVQGKKGGKGDKGIQVDLPGSPGLRGEDGFTGEPGLKGLLGPIG
DLGITGFDGIEGVKGEAGNLGIEGFPGLDGQRGTPGNQGQKGFPGIPGEDGIPGVPGFSG
SKGYSGLQGLYGLDGLKGQKGVSGTPGLDIVGPAGETGVKGRKGESGISNSQPGSPGPSG
LKGFQGNLGDYGQPGLPGLRGLQGPSGIPDIAGKRGNPGFPGPRGSQGYPGASGPPGLDA
FPGEKGVPGENGFPGPTGTRGSRGDSGPAGYRGPDGISGKKGPKGDQGHMGIPGQTGLQG
ERGPVGPKGDTGLPGFPGAPGSQGGLPPSITVPGERGLPGPRGIQGPKGISGGPGPRGPP
GDPGFMGPVGVKGMPGIGGTPGVPGYRGEVGNVGHPGLQGMEGQRGRSGGPGLPGMAGRS
ISVGYLLVKHSQSDQTPMCPVGMSKLWDGYSLLYLEGQEKAHNQDLGLAGSCLPRFSTMP
FLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVEEKEIQPYISRCSVCEAPSVAIAVHSQ
DITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAKGTC
HYFANKHSFWLTSIDQSFHTQPSSETLKAGQLLSRISRCQVCMKNL
NT seq 3381 nt   +upstreamnt  +downstreamnt
tctccaggcccaaatggtctccatggtctccctggtaaccccggtcctctaggcgaagga
ccctggggaaagcatggagacaaagggttccccggatggcccggtacacccggttctcgt
ggggcggcaggaacgccaggtgaaagctttgtaggtatcagaggacagcatggcccaccc
ggtgatgacggcctcgcaggctatgacggagttcagggaacgcctggaagtccgggcggc
tgtattccacatggagctggaggacaggtggatgtgacaggtgattgtgaacctatccca
ggtcctcctggtcagcctggacctcaaggaatcagtggaatatcaggttctccaggagtt
cctggcccaaaaggtttctccggtgcgcaaggagtcaatggagagaaaggagaagaagga
gagcgcggcagaggcggcattcctggaccacgaggttttcctggtccccgtggagacttg
gggactcctggcactaaaggctcttcagggaatccyggtgttccgggcatgcctggccga
tacggatctcaaggggraaaaggtgctcacggagaagtaatgggagcatcgtctggccct
ccaggcgacccaggactacctggcctgcgagggcaaaagggcctacttggagatcaaggg
cagccagggttttcaggaatcccagggatgcctggcatgatcggcttcaggggactgaaa
ggtgccccaggcctgccaggggaagagggaagatccggrccagctgggacgtacggcttc
cccggggatcctggcaggtcgggcccacctggtccggcagggacaactggagagccagga
agaactggagagagaggaayaggaggtgacccaggtcctccaggtccaacaggattaaaa
ggaatgccaggtgtttwtggagatgatggtgggatcggagagcgcggcccrccaggtgac
cctggagaaccaggtgcaactggacgaccaggccttcaaggactcaaaggaacaaaaggt
agtcatggaacgtatggttttgagggagtcacaggaaatcctggtctgaagggctttgag
ggactaaaaggggggtctggaacgcctggagaagttggcctgaaaggactgtcaggcgca
aagggagagagaggcgaacaaggtctgcaaggtaaaccgggggttatgtcacctaaaatg
cttatccacataaagggaaccaaaggagagcacggacaccagggcaatccgggttttacc
ggaccaagaggtaccaaaggtcaccaaggtgtgccgggctatgatggagctcatggtctt
ccaggggaccccagcgatgaaaaaggagttcatggggatccaggtgcacagggcctgcca
ggcattaagggaatgccagggacacctggaagcagaggcattcaaggctttgacggaatg
catggcaacaaggggggcaaaggaagcccgggtgcctacggtcatacaggagtacaagga
aagaaaggaggaaaaggtgacaagggcattcaagtggaccttccaggatctccaggattg
agaggagaggatggatttacaggagaaccaggtctgaaaggtctacttggaccaatcggg
gaccttggcataaccggatttgacggtattgaaggggtaaagggagaagccgggaatctg
ggaatagaaggattcccagggttggatgggcagagaggaactccggggaaccaaggtcaa
aagggttttcctggaattcccggggaagatggaataccaggmgttcctggcttctccgga
agtaaaggttattccggcctacagggtctttatggattagatggactgaaaggacagaag
ggtgtctcaggaacaccaggtctggacattgttggacctgctggagaaactggagttaaa
ggcaggaaaggagaaagcggtatttccaacagccagccaggttctccaggtccatcagga
ctgaaaggcttccagggaaatctgggtgactatggccaacctggactgccaggattacgt
ggccttcagggaccaagcgggatcccagacatagcgggaaagagggggaatcctggcttc
ccaggacctcgaggatcccaaggttatcctggagcaagcggaccacctggactggatgct
ttcccaggagagaaaggtgtaccaggcgaaaatgggttccccggccccactggcacgaga
ggatctcgaggagattcaggtccagcaggctacaggggccctgatggaatctctgggaag
aaaggaccaaagggagaccaaggtcacatgggaattcctggacagactggcttacaggga
gagagaggaccagtgggcccgaaaggagacactggattgccaggttttcctggagcgcct
gggagccagggcggtcttccaccttccattacagtcccaggagaaagaggccttccagga
ccgcgaggtatccaaggcccgaaagggatttcaggggggccaggacctcgaggcccacct
ggagatccagggttcatgggacctgttggagttaaaggcatgcctgggattggtggtact
ccaggagtgccaggttaccgtggcgaggtgggcaatgtggggcaccctggtctccaaggc
atggaaggtcaaagaggcaggtccggyggcccaggattacctggcatggcgggccgcagt
atcagcgtgggctacctgctggtgaaacacagtcagtcagaccagacgccaatgtgtccg
gtgggaatgtctaaactgtgggacggttacagtctactgtacctggagggccaagagaag
gcccacaaccaggacctcggtttggctggttcctgcctcccacggttcagcaccatgccc
tttctgtactgcaaccctggggacatttgctactacgccagcagaaatgataagtcctac
tggctgtcaaccactgctcccctccccatgatgcctgtggaagaaaaagaaatccagccg
tacatcagccgttgctcggtttgcgaggctccatcagtcgctattgcagttcacagtcag
gacatcaccatcccacagtgtcccgtgggctggaggagcctgtggattggctactcattc
ctcatgcatacggcagcaggaaacgaaggcggcggtcagtccctgtcatcgcccggctcc
tgcctggaggacttccgcacaacgcctttcattgagtgtaacggagccaagggcacatgc
cactactttgctaacaagcacagcttctggctgacatccatagaccagtcgttccatact
cagccatcatcggagacgctaaaggcgggccagctcctctcacgcatcagccgctgtcag
gtctgcatgaagaacctgtga

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