Poecilia reticulata (guppy): 103460308
Help
Entry
103460308 CDS
T05149
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103460308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103460308
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103460308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF3043
Sec62
PFF1_TM
NPR3
Tim54
Serinc
CDC45
DUF2126
GmrSD_N
CLN3
Neur_chan_memb
ADI
MDM10
Zip
RR_TM4-6
Hamartin
Piezo_TM1-24
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
103460308
NCBI-ProteinID:
XP_008400632
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MAKVAPLIPSIVLQDMEEEAEPGDVTEGLRRPQRAGAGALFNINNSNNNEEEDEEEKKRK
KKEKKEKREKREKEKQEKKERKEQKQKEKEEKEKEKQKEKEKLEKEKKAKEEAAREITVI
DPAGNTYYHWLFIITIPVMYNWTLIIARACFEELQTDYLIMWFVVDFICDIIYIMDMVFR
TRTGYLEQGLLVKDEQKLRERYMKTFQFKLDLVSMIPTDILYLILGVTYPEIRLNKLLRF
NRMMEFFQRTETRTNYPNALRISNLVMYILIIIHWNACLYYSFSKAIGFGSDRFVYPDPT
DPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVGNVGS
MITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKYLP
DKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVFSPGDYICKKGDIGREMYI
IKEGKLAVVADDGITQFVVLSEGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSK
DDLMEALTEYPDAKALLEEKGRQILMKDGLLDLELAAQGPDPKEIEDKVDRMTSNLDTLQ
TQYARLLAEHDATHSKLKHRVTRLEKKLAPPREDAPGDAPPPPTPETTKEEEKK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggtagcaccgctaatccctagcatcgtgctgcaggacatggaggaggaggcg
gagccaggtgacgtcacagaggggctcaggagaccccaaagagccggagctggagctctg
ttcaacatcaacaacagcaacaacaacgaggaagaggacgaggaggagaagaagagaaag
aagaaagagaagaaagagaagagggagaaaagagagaaggaaaagcaggagaaaaaggag
aggaaggagcagaaacagaaggagaaggaagagaaggagaaggagaaacagaaagagaag
gagaagctggagaaagagaagaaggccaaggaggaggcggcgagagagatcacagtgatc
gacccagctgggaacacgtactaccactggctcttcatcatcaccatcccagtcatgtac
aactggaccctgatcatagccagggcttgttttgaggagcttcagaccgactacctgatc
atgtggttcgttgtggactttatctgtgacatcatttatatcatggacatggttttcaga
accagaacaggttacctggagcaaggtttactggtgaaagacgagcagaaactgcgtgaa
cgttacatgaaaaccttccagttcaaactggatttggtctccatgattcccactgacatc
ctgtacctcattcttggtgtcacctaccctgagatccgcctcaacaagcttctaaggttt
aataggatgatggagttcttccagcgcactgagaccagaaccaattaccccaatgctcta
cgcatctccaaccttgtcatgtacattctcatcatcatccactggaatgcctgcctctac
tactccttctccaaagccatcggttttggttctgacaggttcgtgtatcctgacccgacg
gatcctgagtttggccgtctggtgaggaagtatgcctacagtatgtactggtccacgcta
acgctcaccaccattggagaaacgccgccccctgtggagaactcagagtacttctttgtt
gtgacggacttcctggtgggtgtgctgatttttgccaccattgtcggtaacgttggctcg
atgatcactaacatgaacgctgccagagccgacttccaggcccggatcgacgccatcaag
cagtacatgagtttccgaaaggtaactaaagacctggaaaagcgagtgattaagtggttt
gacttcctgtggaccaataagaaggctgtggatgagcgagaggttctgaagtaccttcct
gacaagctaagggctgagatcgccatcaacgtacatctggacaccctgaagaaggtccgg
atctttgcggactgcgaggctggtctgttggtggagctggtgctgaagctgcagccgcag
gtcttcagtccaggagactacatctgcaagaagggtgatatcggcagggagatgtacatc
atcaaggaagggaagctggctgtggttgctgatgatgggatcacacagtttgttgttcta
agtgaaggaagttacttcggggagatcagtatcctggctatcaaaggtagtaaggcagga
aacaggaggacagctaacatcaggagcatcgggtactccgacctcttctgtctttccaaa
gacgacctgatggaggcgctgacagagtatccagacgctaaagctctgctggaggagaag
ggacggcagattctgatgaaggatggactgctggatctggagttggcagcccagggccca
gaccccaaagagatcgaggacaaggtggacaggatgacgagcaacctggacacgctgcag
acccagtacgcccggctgctggcagaacacgatgcgactcacagcaaactcaaacacaga
gtcacccggctggagaagaagctggcgccgccacgggaggacgcacctggtgatgctccg
ccccctcccacacctgagaccaccaaagaagaagagaagaaataa
DBGET
integrated database retrieval system
