Poecilia reticulata (guppy): 103460357
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Entry
103460357 CDS
T05149
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103460357
04091 Lectins [BR:
pret04091
]
103460357
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103460357
Lectins [BR:
pret04091
]
C-Type lectins
Others
103460357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Motif
Other DBs
NCBI-GeneID:
103460357
NCBI-ProteinID:
XP_008400701
LinkDB
All DBs
Position
LG2:complement(39732367..39768583)
Genome browser
AA seq
1710 aa
AA seq
DB search
MVALTSHSATTSRPTTEVSESLSCTISPSAGTILDPFSIMCTSAQLCSNCRYCFKTDEKH
LLCSKTGEIXVLXLPVGDRRAXNKLLITATAKNSSYEVNATITAQVWDATADSSSVDGLD
SAVLKAVEKLESEGLLSAVSTGELFNSVAEKLNSKTDGSEKEARQELRHKMLDLMIGLVK
ESPTQTPEETQAVARALTTLIQKDDELSLSAQIDAATLFANLSLSVLDMNVSAAEDKDDV
IIAASIIVEGVGVILDYSSNKNISDALLVALSIVQSTLLKTMTVNDGPIIIQQPHISLFV
NRVKPESLHKESISANLSSQPTFSLPQLPSDMFLSDEPVDVRMLSLDKNPFSWNEKGNIS
GLMGGLSFTRQDGSGIXVENLSEDIEILLPRPAGEQVNTSVLDLGNYSTTAIDVPSADST
LLLKMVPSVDPLPFKLFLGYMDYPTDTNHVAMIQMPLPGSTQEERYTWLLSPTNLKGNTG
LHYLVVRPIVGPGVKSINATLSITPITSSCKFWNETLLDWKDSGCRVGVKTTHLVTQCLC
NHLTFFGSSFFVTPNLVDPSRTAELFATFAENPVVVCFVGALFVTYLLVVVWARRKDIKD
TVKVKGTLLEDNDPMDNYSYLLCVCTGHRIGASTSSQVVVTLLGADGNSKPHHLTDPQKP
VFERGAVDLFLLTTPSSLGELQGIRLWHNNSGNHPAWFVGTVLVQDLQTEQKWYFLCNSW
LAIDMGDCCLDKLFPVSTEMDLKKFSNLFFMKTARDFSDGHLWFSVITRPPSSSFTCVQR
VSCCFSLLLCTMLTSIMFYGIPTDPSDQVMDLGHFEFTWQQFMVGVQSSLIMFPINILIV
SVFRNTRPRESSCCQRKTKKASRRQQKRSVQTTSLQPGATISSTGSSTLDAIIEDIARIL
QSLSETTKCNIPSVKSDFGSGKETDINAVLAKVEEFLKQNTKCSKDTQTKTQCQLSAEGI
EKKSNKTQHLYRQMCHLEKELSLMDPSSFPSPLCFEKAQKQVQGMKSYLEDQLFSHLDLD
EPKHEKFVPEHDTSNDDVVLKKKPQRRGFLPWWFIFVGWLLVIGTSFVSGYFTMLYGLKF
GKERSISWLVSMIVSFFQSLLFIQPLKVVCLAVFFALVIKRVDEEDFQNVAFERSGRMSG
GQNNKQTSQWDYHLYEPPPPADIERMKRNKIMEQKAFALLNEILVYIGFMWMLLLVAYGQ
RDPNAFLLKQHIKNSFSDNVPESMSLQDVFTWANTTLLQNLFGEYPGFITDGNSKLVGNA
RVRQLRVQQNSCQIASLMLGLVPDCHAPYSWETEDTGSYEAGWNHSVKDNMWESASSPWT
YQTEAELRSLPVWGRLVLYRGGGFVAELGPDIQNASSTLDYLFRNKWLDKYTRAIFVEFT
VYNANVNLFCIVTLLMETSAVGAFQFYSDLQAVRLYPSTGGLYFFVMASEIIYLLFILYY
MFKQAKLLKQHRWLYFKNKWNLLELSIILLSWSATAVFIQRTLLGNRDMKFYQTHKDQFA
SFCETAAADSVLQYLVAFLVLLSTVKLWHLLRLNPKMNLITAALHRAWNDISSFLLIIVI
TLVAYSVASNVIYGWKISSYKTFLDSLLTIISLQIGIFNYDQVLDSHPVLGGLLFGSCIV
FMTFVVLNLFISVILVSLNLEQMYHKPSEEEEIVDLLLNKLCNLFGIRYKSGKDAVEPDG
EGSSNLTLNNNRNILTSTSAEDNIYQKSDN
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggttgctcttacatctcacagtgcaacaacttcaagaccaaccactgaggtttctgaa
agcctctcatgcactatatcaccatcagctggaactatacttgatcctttcagtataatg
tgcactagtgcccagctttgttcaaattgtcggtactgttttaagacagacgaaaagcat
ctgttgtgcagtaaaactggagaaatcarrgttctgyaccttcctgtyggagacagaaga
gctgrgaacaaactcctcattacagcgactgcaaaaaacagcagctatgaagttaacgcc
actataaccgcacaggtatgggatgctacagcagactcgagctcagtggacggtttggac
tcagcggtactgaaagctgtggagaagctggagagtgaaggtttactgtcagctgtttct
actggagaactttttaactcggtggctgaaaagctgaacagcaaaactgatggatcagaa
aaagaagctcgacaagagctcagacacaagatgctggacttgatgattggactagtgaag
gagtctccaactcaaactccagaagaaactcaggctgtagccagagcgcttactactctc
attcagaaagatgatgaactcagcttgtctgcacagattgatgccgccacattgtttgcc
aacctgagcttatctgtcctggatatgaacgtgagcgcagctgaagacaaagacgatgtt
atcatcgctgccagcatcattgtggaaggagtgggcgtgattttggattattcttccaac
aaaaacatctctgatgctttgcttgttgctctgagcatcgtacagagcactttgttgaaa
acaatgacggttaatgacggtccaattataatacaacaacctcatatcagtttgttcgtc
aatcgagtaaaacctgagagtttacacaaagagtccatcagtgctaatttaagttctcag
cccacgttttcgctgccacaactcccatctgacatgtttctgtcagatgaaccagtggat
gtccggatgctgagtttagataaaaatcccttttcttggaacgagaaaggaaacattagt
ggactgatgggtggtctgtccttcacaagacaagatggatccggtatccytgttgagaac
ttaagtgaagatattgagattctgttgccaaggcccgctggagaacaagtgaacacctca
gttttggaccttgggaactacagcacaacagccatagatgttccctcagccgactccact
ctgcttttaaagatggtgccttctgtggatcctttgcccttcaaactgttccttggctac
atggattaccctactgacacaaatcatgtagcgatgatacagatgcctcttccgggatct
actcaagaagaaagatacacgtggcttcttagtcccacaaatttaaagggaaacactgga
ttgcattatcttgtggtgaggcctattgttggtccaggtgtgaaatctataaatgccaca
ttatccatcacccccattacatcctcatgcaaattttggaatgaaactctattggactgg
aaggattctggatgcagagttggtgttaagaccacgcatttagtcacccagtgcttgtgc
aaccacctcacattttttggcagctctttctttgtaactccaaatctcgtcgacccttca
cgcactgctgagctttttgcgacctttgctgagaacccagtggttgtgtgctttgtcggg
gctctttttgtgacctacctcctcgtggttgtgtgggcacgaagaaaagacatcaaggac
acagtcaaggtaaaggggacattgctggaggacaacgaccccatggataattacagctac
ctgttgtgtgtttgcactgggcatcgcataggagcctccacttcctctcaggttgtagtc
actcttctgggtgcagacggcaacagtaagcctcatcacctgactgatccacagaaaccc
gtgtttgagcgtggagccgtggatttgttcctgctcactacaccgtcctctttgggagag
ctgcagggcatcagactgtggcacaacaattctggaaaccatcctgcttggtttgtgggc
accgtccttgtgcaggatttacagacagagcagaaatggtattttttatgcaactcctgg
ctcgcaatagacatgggtgattgctgcctcgataaactctttcctgtttcaacagagatg
gatctgaagaaattcagtaacttgttcttcatgaagacggcaagggatttcagtgacgga
cacctttggttctctgtgatcactcgaccgccgagcagcagctttacttgtgtgcagagg
gtgtcctgctgtttctccctgctgctctgcaccatgctgaccagcatcatgttttatggg
atcccaacagacccctcagatcaggtcatggatttgggtcactttgagttcacctggcag
cagttcatggttggggttcagagttccctcatcatgtttccaataaacatcctcatagtc
agcgtcttcagaaacactcgcccacgggagtcgtcttgttgtcaaagaaaaacaaagaaa
gcaagtcgccgccagcaaaaacgcagcgtacagacaacttctctgcaaccgggagctacc
atcagcagcacagggagctccactttagacgccatcatagaagatattgcaagaattctt
cagtccctgtctgagacaaccaaatgcaacatcccatccgtcaagtctgactttggttct
ggaaaagaaactgacattaatgctgtcctcgccaaagtggaagaatttctcaaacagaat
accaaatgcagcaaagacacccagacaaaaacacagtgtcaactatcagccgaggggatt
gagaagaagagcaacaaaacccagcatctgtacagacaaatgtgtcaccttgaaaaggag
ctgagtctgatggacccgtccagcttccccagcccactatgctttgaaaaggcccagaag
caggtccaggggatgaagagctaccttgaagatcagctcttcagccatttggatctagat
gagcctaaacatgagaagtttgttcctgagcatgacacttcaaatgatgacgttgttctg
aagaaaaagccacagcgtcggggttttctaccctggtggtttatctttgtcggctggttg
ctggtgattggaaccagttttgtttctggatatttcacgatgctttatgggctgaaattt
gggaaggagcgctccatcagctggttggtatccatgatcgtctccttctttcagagtctt
ctctttattcagccactgaaggtggtatgtcttgcagttttctttgcactggtaataaag
cgagtcgatgaagaagattttcaaaacgtggcatttgaaagaagtggaagaatgtctggt
ggtcaaaataataaacaaacaagccaatgggattaccatctttatgagccacctcctcct
gcagacatcgagagaatgaaaaggaacaagattatggaacagaaggcctttgctttgctc
aatgagattttggtttacatagggttcatgtggatgttactgctggtggcctatggccag
agagatcccaatgcttttttgctgaaacagcacattaaaaatagcttttctgacaacgtc
ccagagagcatgagtcttcaggatgtttttacctgggctaacaccactctactacaaaac
ctttttggagaatatccaggatttatcacagatggaaactccaagctggtggggaatgct
cgtgttcgccaattaagagttcagcagaactcgtgtcagattgcaagtctcatgcttgga
ttagtgccagactgtcatgccccctattcatgggagacagaagacacgggttcctatgaa
gctggctggaatcactctgtcaaggacaatatgtgggaaagtgcctcctctccatggacg
taccagactgaagctgagctcagaagtctgccagtctggggacgactggtgctctacaga
ggaggaggatttgtagctgagctcggaccagatattcaaaatgctagcagcacacttgat
tatcttttccgtaataaatggcttgataagtacacaagggcaatctttgtcgagttcacg
gtttacaatgcaaatgtgaacctcttctgtatcgtcacgctcttgatggagacctcagcc
gtaggagcatttcagttctacagtgatctgcaggctgttcgtctttacccatcaacaggg
gggctttacttcttcgttatggcttctgagatcatttatttgcttttcattctctactac
atgttcaagcaggccaaattattgaagcagcatcgttggctttacttcaagaacaagtgg
aaccttctggagctgagcatcatcctgctgagctggagtgccactgcagtttttatccaa
aggactctgcttggaaaccgtgatatgaaattctaccaaacccacaaagaccaatttgcc
agtttttgtgaaactgctgcagctgactcagttcttcagtatttggttgctttcttggtt
cttctgtccactgtcaaactgtggcaccttctcagactgaaccccaagatgaacctgatc
acggctgcactgcatcgagcatggaatgacatctcgagttttctactcatcattgtgatc
acgctagtggcgtactcagttgcaagcaacgtgatttatggctggaagatttcatcttac
aaaacctttttagattctcttctgaccatcatcagtctgcagataggcatcttcaactat
gaccaggttttggacagtcacccggtgctcggcggattgctgtttggctcctgtattgtc
ttcatgacgtttgtggttctaaatctcttcatttcagtgattcttgtatcgctaaacttg
gagcaaatgtatcacaagccctctgaagaagaagagattgttgacctcctgctgaacaaa
ctctgcaacctgtttggtatcagatataaaagtggaaaagacgccgtggagcctgacgga
gagggcagcagcaacttgacccttaataacaacaggaatattcttaccagcacctcggct
gaagacaacatttatcaaaagtctgacaactaa
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integrated database retrieval system
