Poecilia reticulata (guppy): 103460361
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Entry
103460361 CDS
T05149
Symbol
ddx27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103460361 (ddx27)
03009 Ribosome biogenesis [BR:
pret03009
]
103460361 (ddx27)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103460361 (ddx27)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103460361 (ddx27)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Pre-60S particles
Helicases
103460361 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
103460361
NCBI-ProteinID:
XP_081462860
LinkDB
All DBs
Position
5:477243..489411
Genome browser
AA seq
754 aa
AA seq
DB search
MLEQLGLIGTIRDEDLSPEEPATESEPEEEPIILNRKKKFGGQRSTDFSCDFEFGERDGL
SRDDDWAMSDVLKQLKKKRTLTTLDQKIEKVRKKRKAEEKSSQSSEAEGSSEMKEEEEEE
PADRDEEEEDGDEEEEFGSSDEEVLTKSDTLREKERRGRKRKDAEEEAPETFSEDASQYN
EQLMFEEMNLSRPILKAVTALGFREPTPIQKACVPVGLLGRDLCACAATGTGKTAAFMLP
VLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKSQEAA
LRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEIIRLCSYN
RQTMLFSATMSEEVKDLAAVSLKQPIRIFVNSNTDVAPFLRQEFVRIRPHREGDREAVVA
ALLTRTFQDHVMVFTQTRKQAHRLHILLGLLGLKVGELHGELSQNQRLENLRRFKDEQID
ILVATDVAARGLDIDGVKTVINFTMPSTTKHYVHRVGRTARAGRSGRSVSLVGESERKTL
KEVVKSAKNSVKARVLPTDVILKFRDLISKLEKDVEAVMKLEREEREMAASEAKLSVAQK
RLEGSASSSDSQRVWFQTQQERKQSRMSKALQDFDLALRGKKKREKFLKDGKKKQLTSEE
RAQFEILKAQMFAERAAKRERRAKKARVMPEDELPLKATNQKAASRGRKSVFDEELTNTS
RKSLKNYRAGPSFADRKRLGLDRKRSGGSRFRKK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcagctgggtctgatcggaaccatccgggacgaggatctgagtccagaggaa
ccagcaactgaatccgagccggaggaggagcctatcatcctgaaccgtaagaagaagttt
ggaggtcaaaggtcgacagacttcagctgtgactttgagtttggagagagagacggtctg
agccgggatgacgactgggccatgagcgacgtcctgaagcagctcaagaagaagagaacc
ttgacgaccttggaccagaaaatagagaaggtcaggaagaagaggaaagctgaggagaaa
tcgtctcagagttctgaagctgaaggctcctcagagatgaaggaggaggaagaggaggag
cctgctgacagagacgaagaggaggaggatggtgatgaagaggaggagtttggctcaagt
gatgaagaggttctgaccaaatcagacactctgagggagaaagagcggcgagggaggaag
aggaaggatgcggaagaggaggctccagaaacgttttccgaagacgcgtctcagtacaac
gagcagctgatgttcgaagagatgaacctgtcccgacccatcctcaaggccgtcacggct
ctgggcttcagagagccgacgccgatccagaaggcctgtgttcctgtggggctgctgggc
agagacctgtgtgcctgcgctgccaccggaaccgggaagacggccgccttcatgctgccg
gtgttggagcgcttggtttacaaacccaggacgtcccaggtgacccgggtcctggttctg
gttccgaccagagagctggggatccaggtccactcggtggcccgccagttggcccagttc
acctccatcaccacctgcctggctgttggcggtttggacctgaagtcccaggaggcggct
ctgagggcgggtccagatgttctgatcgccacaccgggccgactgatcgaccaccttcac
aacacgccgagcttcgagctgagccacatcgagatcctgatcctggacgaggccgacagg
atgctggacgagtactttgaggagcagatgaaggagatcatcaggctgtgctcctacaac
cggcagaccatgctgttctcagccaccatgagcgaggaggtgaaggacctggcggcggtg
tcgctgaagcagccaatcaggatctttgtgaacagcaacacggacgtggcgccgttcctc
cggcaggagttcgttcggatccgaccgcaccgggaaggagaccgggaggctgtggtggca
gcgctgttgacccggaccttccaggaccacgtgatggtgttcacccagacccggaagcag
gcccaccggctgcacatcctgctgggcctgctgggcctgaaggtcggggagctgcatgga
gaactgagccagaaccagaggctggagaacctcaggaggttcaaagacgagcaaatcgac
atcttggtggcgaccgacgtcgcggcccgaggtttggacatcgacggcgtgaaaacggtg
atcaacttcaccatgccgtccaccaccaagcactacgtccaccgggtcggccgcacggcg
cgcgccggccgctccggccgctccgtgtctctggtcggagagtcggagaggaagacgctg
aaggaggtggtgaagtcggccaagaacagcgtgaaggcccgcgtcctgcccacagacgtc
atcctgaagttcagagatctgatcagcaaactggagaaagacgttgaagcggtgatgaag
ctggagagagaggagagagagatggctgcgtctgaggcgaagctgagtgtggctcagaag
cgtctagaaggctccgcctcctccagcgactctcagagggtttggtttcagacgcagcag
gaacgcaagcagagccgcatgtcgaaggctctgcaggacttcgatttggctctgagagga
aagaagaagagagagaagttcctgaaggacgggaagaagaaacagctgacgtctgaggag
cgcgctcagttcgagatcctgaaggctcagatgttcgctgaacgagccgccaagcgggag
agacgggcgaagaaagccagagtcatgcctgaagacgaactgccactgaaagcaaccaat
cagaaagcagcaagcagaggcaggaagtcggtgtttgatgaggagctgaccaacaccagc
aggaagtccctgaaaaactacagagccgggccgtccttcgcagacaggaagcgcctcggc
ttggacaggaagcggtcgggcggctccaggttcaggaagaagtga
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