Poecilia reticulata (guppy): 103460705
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Entry
103460705 CDS
T05149
Symbol
sympk
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
pret04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103460705 (sympk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103460705 (sympk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103460705 (sympk)
03019 Messenger RNA biogenesis [BR:
pret03019
]
103460705 (sympk)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103460705 (sympk)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103460705 (sympk)
U7-dependent histone pre-mRNA processing factors
103460705 (sympk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_MROH2B_C
Cnd1
Adaptin_N
AbiJ_NTD3
Motif
Other DBs
NCBI-GeneID:
103460705
NCBI-ProteinID:
XP_008401208
UniProt:
A0A3P9NHN5
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MERPSKDREPPAVIDVTTSEKVVELLNQAALIPTDEKLTVLKQVQELIINKDPSLLDNFL
DEIIAFQTDRSMEVRKFVIGFIEEACKRDNELLLRLIANLNLLLKDDSVNVVKKAVLSLT
QLYKVALQWLVRARSVSEMQEACWDLVSQMSGDVLSMLDSENDGVRTHAIKFTESLIVTL
SPRTPESDVPKRQEGDISLDKVPRDHPYIRYDALCDEGKAALDKLLKFMVHPAISSINLT
TALGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVSVLKHPCS
LEFQVQIGTLLLDLGMPQSEISRNTPPPREQRKRPRYEPASEGKKVKMEPALIEDDEDKE
EPVPLAAPKPAAAPTPQSAIDLTAEFLRPLLTPENVANLVLISMVYLPDIMPASFQATYT
PVESAGTDAQIKHLARLMATQMTAAEIGPGLEQCKAREDESGKEEPVEDESGGKDVLIRR
SLSSMVGQAISVVGGYSEKPPAPEAPAVKRLPEPILPSVQTKMAGAGGRKKVFRLADVVQ
PLSDSQIGALSSRAVKRILHSEKAVSQSGMSHVRVKLLSRLVTQFEGVMKDDVLDYVLED
MRCRSDLAFSLLYQEYNSYLSQLPAGLLDGYDHCLYTLLSGLQEKPEQRDGLFTKLVLEA
PIITESALDVIRRYCEDESRVYLGMTTLKELIVKRPSRQFQYLHVLLDLSSHDKEKVRST
ALAFLKRMYEKDHLRDYIEKFALNYLQLLVHPNPPSLLFGADKDTEVAAPWTEETVRQCL
FLYLSLLPLNHRLVHELASVYTEAIADIKRSVLRAIEQPIRGMGMNSPELLLLVENCPKG
AETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKNEVIQALPKLI
KLNPIVVKEVFNRLLGTQHSEGSSSVSPLTPGDLLIALHNIDSTKCDMKSIIKATNLCFG
EKNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLILKQVWKY
PKVWEGFVKCCQRTKPQSYSVLLQLPPPQLASVFERCPEMRAPLLQHVLSFTPHQQAHIP
TSIMTVLEAHKKPDPVPAEPVLKEEPAEPTAAQQPGPGPEPGPEPGPAPQQETVLLRDEE
EPMEQEEAEPPTPETDDPIDQEEEPKAAEEPEPEPEPGQEPLEEPMEEPEAELSDQPEPL
AASEPEAAPPAAGSGSEDAE
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtccttcaaaggacagggagcctcctgctgtcatcgacgtcactaccagcgag
aaggtggtggagctgctgaaccaggcggctctgatccccacagatgaaaagctcactgtt
ctcaaacaggttcaggaactcatcatcaacaaggatccgtctctcctggacaacttcctg
gatgagatcatcgccttccagacggaccggtccatggaagtcaggaagtttgtgatcggg
ttcatcgaggaagcctgcaaacgggacaacgagcttctgctgcggctcatcgccaacctg
aacctgctgctgaaggacgacagcgtcaacgtggtgaagaaggccgtcctgtcgctgacg
cagctctacaaggtcgccctgcagtggctggtccgggcccggtcggtgtcggagatgcag
gaggcctgctgggacttggtgtcccagatgagcggagacgttctgagcatgctcgactcg
gagaacgacggcgtccggacgcacgccatcaagttcaccgagtcgctgatcgtcacgctg
tcgcctcggacgcccgagtccgacgtccccaagagacaggaaggagacatcagcctggac
aaggttcccagggaccacccctacatccgctacgacgctctgtgtgacgaggggaaggcg
gcgctggacaagctgctgaagttcatggttcacccggccatctccagcatcaacctgacg
accgcgctcggctccctagcaaccatcgctaggcaacggcccatgttcatgtccgaggtg
gtgcaggcctacgagacgctgcacgccaacctgccccccaccctggccaagtcccaggtg
agcagcgtgaggaagaacctgaagctgcacctggtgtcggttctgaagcatccgtgcagc
ctggagttccaggtccagatcggcacgctgctgctggacctgggcatgccgcagagcgag
atcagccgcaacacgccgccgccgcgcgagcagaggaagcgcccgcgctacgagcccgcc
tccgagggcaagaaggtcaagatggagccggcgctcatcgaagacgacgaggacaaagag
gagccggtgccgctcgccgccccgaagccggcggccgccccgactccgcagtcggccatc
gacctgacggccgagttcctgcgacccctgctgaccccggagaacgtcgccaacctggtg
ctcatcagcatggtgtacctgccggacatcatgccggcgtccttccaggccacctacacg
ccggtggagtcggccggaaccgacgcccagatcaaacacctggcccggctgatggcgacc
cagatgacagcggccgagattggaccaggtctggagcagtgcaaggcgcgggaggacgag
tcggggaaggaggagccagtggaggacgagtcgggggggaaggacgtcctgatcagacgg
tcgctgtcctccatggtgggccaggccatctctgtggtgggcggctacagcgagaagccg
cccgcccccgaggcgcccgccgtcaagaggcttcctgagcccatcctgccctccgtccag
accaagatggccggcgccggcggcaggaagaaggtgttccgcctggcggacgtggtccag
ccgctgtccgactcgcagatcggcgcgctgtcctccagagccgtgaagcgcatcctgcac
tccgagaaggcggtgtcccagagcggcatgtcccacgtcagggtgaagctgctgtcccgg
ctggtgacccagttcgagggcgtgatgaaggacgacgtcctggactacgtcctrgaggac
atgcgttgccgtagcgacctggccttctctctgctgtaccaggagtacaacagctacctg
agccagctgccggccggcctgctggacggatacgaccactgcctctacacgctgctgtcc
gggctgcaggagaaacccgagcagagggacgggctcttcaccaagctggttctggaggct
cccatcatcaccgagtcggcgctggatgtgattcgccgctactgtgaggacgagtcccgg
gtttatctgggcatgacgacgctgaaggagctgatcgtcaagaggccgtccaggcagttc
cagtacctccacgttctgctggacctcagctcccatgacaaagagaaggtgcgcagcaca
gccctggccttcctgaagcggatgtacgagaaggaccacctgagggactacatcgagaag
tttgccctgaactacctgcagctcctggttcacccgaacccgccctcgctgctgttcggc
gccgataaggacacggaggtcgctgctccgtggacggaggagacggtgagacagtgtctc
ttcctctacctgtccctccttcctctgaaccaccggctggtccatgagttggcgtccgtc
tacaccgaggcgatcgccgacatcaagcgcagcgtgctgcgcgccatcgagcagccgatc
cgcgggatggggatgaattctccagagctgctgcttctggtggaaaactgtcccaagggg
gcagagactctggtcactcgctgtctgcacattttgaccgataaagtgcctccgtcgccg
gagctggtggagcgggtccgggacctctaccacaagcgtgttccggacgtccgcttcctg
atcccggtcatcaacggcctggagaagaatgaagtcatccaggctctgccaaagctcatc
aagctcaacccgatcgtcgtgaaggaagtcttcaaccggctgctgggaactcagcacagt
gagggaagctcttcggtttctccgctgactccaggcgatctgctcatcgctttgcacaac
atcgactcaacaaagtgcgacatgaaatccatcatcaaagccaccaacctgtgcttcggg
gagaagaacgtctacacgtcggaggtgctggcggtggtgatgcagcagctgatggagcag
aacccgctgcccatgctgctgatgcgcaccgtcatccagtccctcaccatgtacccgcgc
ctgggcggcttcgtcatgaacatcctgtcccgcctcatcctcaagcaggtgtggaagtac
cccaaggtgtgggagggcttcgtgaagtgctgccagcggaccaagccgcagtcctacagc
gttctgctgcagctgccgccgccgcagctggccagcgtgttcgagcgctgcccggagatg
agggcgccgctgctgcagcacgtcctgtccttcacgccgcatcagcaagctcacatcccg
acctccatcatgacggtgctggaggcccacaagaagcccgacccrgtgccagcggagccg
gttctgaaggaggaaccagcagaaccgactgccgcacagcagccaggacccggacctgaa
ccaggaccagaaccaggaccggcgccacagcaggaaaccgttctgctgcgggacgaagag
gaaccgatggaacaggaagaggcggagccaccgacacctgagacggacgacccgattgac
caggaggaagagccgaaggccgcagaggaaccagaaccagaaccagaaccgggccaggag
ccattggaggaaccgatggaggagcctgaggccgagctgtcggatcagccggaaccgctc
gcggcttcagaaccggaggcggcgccgcctgcagctggaagcgggtcggaggacgcagag
tag
DBGET
integrated database retrieval system
