Poecilia reticulata (guppy): 103461234
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Entry
103461234 CDS
T05149
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103461234 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103461234 (sart1)
04121 Ubiquitin system [BR:
pret04121
]
103461234 (sart1)
Spliceosome [BR:
pret03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
103461234 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
103461234 (sart1)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103461234 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
103461234
NCBI-ProteinID:
XP_008401806
LinkDB
All DBs
Position
LG1:2576633..2579579
Genome browser
AA seq
771 aa
AA seq
DB search
MGSSKKHKEKSRDKDAEDRRREHKKHRHKERERDVSDRDKDRRKRSRSREKSRRESHSKA
ERGGGEPRVKREKVDPGYEESGADIQPQSTSGDGSLSIEETNKLRAKLGLKPLELNEGKK
ELGTKEAPMVAETINPVLIRQQKEMREKLAAMKEKRLLNQKLGKVKAIGDDDWLDDTAGW
VEKSRKLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFVQSKRDSYSSQDLKGLKVQHKV
DSFTEGQTVVLTLQDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEESVD
DMVTFKPHTVLSKYDEEIEGEKKKSFRLGSWGFADGERERELQAMKETLRNQAQSLEMPA
LTIASEYYTPQEMVGFKKTKRKVKKIRKKEKVTIADELLDDTRTSDFGSRARGKGRRQAE
EEQQESKEKVKDGDSWPHELPQMSDDIRMAEMDISDEDDYVPPEPAVIEEDEAEQELQKQ
LEKQRKLRQKQLLKDSGEKVAAQIKVLPKGDDDHDPEKKNNIVFNATSEFCRTLGDIPTY
GLSGNREDQEDIMDFEHEEEKDDGGGSDSEIDENVGWSTVNLDEEQQQADFSTASATILD
EEPIVNSGLAAALKLCTNKGLLDTQMQKVARVKATKGALPNDNYCIEDKMGFDDKYSRRE
EYRGFTQEFKEKDSYRPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKK
LEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttctaaaaaacacaaggaaaagagccgcgacaaggacgcagaggatcgtcgt
cgcgaacataagaaacatcgccacaaggagagagaaagagatgtgtcagaccgtgataaa
gacagacgaaagcgctccagatccagagaaaagagcaggcgggagagccacagcaaggcc
gaaagaggtggtggagagccccgagtaaagagggagaaggtggaccctggttatgaggag
agcggcgctgacatccagccccagagcaccagcggagatggctccctgagcatcgaggaa
acaaacaaactgcgcgctaagctgggcctgaagcccctggagctgaacgagggcaagaag
gagctggggaccaaggaggcgccgatggtggcggagaccatcaaccccgttctgatccga
cagcagaaggagatgcgagagaagctcgccgccatgaaagagaagcgcctgctcaatcaa
aaactgggtaaagtcaaagcaatcggcgacgatgactggctggacgacacggccggttgg
gtggagaaaagcaggaagctggccaaagagaaggagatggcagagaagagagccaagctc
ctggaagagatggatgaagagtttggagtcagcagcctggtggaggaggagtttgttcaa
agcaagcgggactcttattcatcacaagatctgaagggtctcaaagtgcagcacaaggtg
gactccttcaccgagggccagactgttgtcctgaccctgcaggacaaaggtgtgctggaa
gaggaagaagatgtgctggtaaacgtggggctggtggacaaggagaaagctgaaaagaac
gtggagctgaagaagaagaagcccgactataagccctacgaggaagaggagagcgtggat
gatatggtcaccttcaagccgcacactgtgctctcaaagtacgacgaagaaatcgagggc
gagaagaaaaagagcttccgattgggcagctggggcttcgcggacggggagcgagagcgc
gagcttcaggcgatgaaagaaacgctgcggaatcaggctcagtccctggagatgcccgct
ctcaccatcgcctccgagtactacacgcctcaggagatggtcggcttcaagaagacgaag
cgcaaagtcaaaaagatcaggaagaaagagaaggtgacgatcgcagacgaacttctggac
gacacccgtacctctgacttcggctcgagggcgcgaggcaaaggccgcagacaggcggag
gaggagcaacaggagagcaaagagaaagttaaagatggtgacagctggccgcacgaactg
ccccaaatgtctgatgacatcaggatggcagagatggatattagcgacgaagatgattac
gttcctcctgagccagccgtgattgaggaggacgaggcggagcaggagctccagaagcag
ctggagaagcagaggaagttgaggcagaagcagcttctcaaagactctggggagaaggtg
gcggcgcagatcaaagtcctgcctaaaggcgacgacgaccacgatcccgagaagaagaac
aacatcgtcttcaacgccacctcagagttctgcagaactctgggggacattccgacgtac
ggactgtctggaaaccgggaggaccaggaggacatcatggactttgagcacgaagaagaa
aaagacgacggcggaggttcagattctgaaattgacgagaacgttggatggagcaccgtt
aacctggacgaagagcagcaacaggctgacttctccacggcctcagccaccattctggac
gaggagcccatcgttaactccggcctcgcggctgcattgaagctgtgcaccaacaaaggc
ctgctggacacccagatgcagaaggtggcccgcgtcaaggcaacaaagggcgccctgccc
aacgacaactactgcatcgaggacaagatgggcttcgacgacaagtacagccgcagagaa
gagtacagaggcttcacgcaggaattcaaggagaaggacagctataggcccgacgtcaag
atcgagtacgtggacgagtccgggcggaagctcacgccgaaggaagctttcagacagctg
tcgcaccgcttccacgggaagggttctggaaagatgaagacagagaagaggatgaaaaag
ctggaggaagaggcgctgctgaagaaaatgagcagcagcgatactcctcttgggacggtg
gctttgctccaggaaaagcagaaatctcagaaaaccccatacatagtgcttagtgggagt
gggaagagcatgaatgcaaacaacatcactaaatga
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