Poecilia reticulata (guppy): 103461675
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Entry
103461675 CDS
T05149
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103461675 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103461675 (prpf40a)
Spliceosome [BR:
pret03041
]
Complex A
U1 snRNP components
U1 related factors
103461675 (prpf40a)
Complex B
103461675 (prpf40a)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
SLC25_like
Motif
Other DBs
NCBI-GeneID:
103461675
NCBI-ProteinID:
XP_008402192
UniProt:
A0A3P9NTT7
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Position
LG2:33121547..33136627
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AA seq
883 aa
AA seq
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MSSTETNNGPSQAAPYAAVPPAAIPPPYMGPPGIPPHFPPMGIPPMAQRPPSMTPMPPGI
MPPGIMPPMAAPPMGQMPSMIPPMIPGMMLPPRIPAATLQPTGPPGVDTTVPAAAAPGTT
SATNGSPPEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPWK
EYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTEAAAPGTTAAPAVQADKN
TAAMVTVKEAETTAAVPEEQQAQVTAHQTAEVKAVEAPVTSSETPVVAESKPSVEVKEEE
RPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVWSCV
PERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKTMLKQATPPLEPEASWEEVRERFLKEAAFEDVTLESERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSASESEEEEYHKKKKRSQSKSPSERSSSGE
SERSYKKSKKHKKKGKKRRHKSASPDSDGEKKGRERDGKRERDSEKDKENDKTRGKSRSE
SKQKSPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacggagacaaataatggcccaagccaggcggcaccttatgcagctgtcccc
cctgcagccataccgcctccatatatgggaccaccaggaataccacctcacttcccaccc
atgggaataccccctatggcgcagcgacctcctagcatgactccaatgccacctggaata
atgccaccaggcataatgccaccaatggctgctccgccaatgggacagatgccaagyatg
ataccacccatgatcccgggaatgatgctgcctcctcggattccagctgcraccctacag
ccgacgggaccccctggtgttgacaccacagtccctgcagcagccgcacctggaacaact
agtgcaacaaatggatcccctccagaagaacagccaaagaagaaatctgtgtggacagaa
cacaaatctttagatgggaaaacatattattacaatacagaaaccaaacagtccacatgg
gagaaaccggatgaactgaaatctcctgcagagcaaatgctgtctaaatgcccctggaag
gagtacaagtctgacacagggaagccttattattacaactctcagacaaaggaatccaga
tggaccaaacccaaggagctggaggatctggaggctatgatcaaagcagaggagagtgga
acaacggaggctgcggcgcctggaacaactgcagctcctgcagtgcaggccgataaaaat
acagccgccatggtgaccgtaaaggaggcggaaactacagcggcggtcccagaggagcag
caggcccaggtgaccgcacatcaaacagctgaggtcaaggctgtggaggcacctgtgact
tcctcagagacccccgtcgttgcagagagcaaacccagygtcgaagtcaaagaagaagag
cgacctgaacttcagaagaaaacctacaagtggaacacaaaagaagaagccaagcaagcc
ttcaaagagctgctgaaggagaagggtgtttcctccaactcctcatgggaacaggccatg
aagctgattatcaatgaccctcgctacagtgctcttcccaagctgagcgagaagaagcag
gcatttaatgcctacaaagtccaaaccgagaaggaggagaaggaagaggccaggattaaa
tacaaggagtccaaagaaaagttccagaggttcttggagaatcacgagaagatgacgtcc
accaccagatacaagaaagcagagcaaatgtttaatgagctggaagtgtggagctgcgtt
cctgagagagacagactggagatctacgaagacgttttgttctacctggcgaagaaagag
aaggaacaagccaagcagctgaggaagaggaactgggaagctctgaagaacatcctggac
aatatggccaacgtgacatatcgcaccacctggtccgaggcccagcagtatctgctggac
aatcccacgtttgccgaggacgaagagctgcagaatatggataaagaggacgccctcatc
tgttttgaggagcacatacgagctctggagaaggaggaggaagaagacaagcagaagact
ctcctcagggaacggagacggcagcgcaagaacagagagtccttccagaaatttctggat
gagctccatgatcacggccagcttcactccatgtcctcgtggatggagatgtacccgacc
ctgagctctgacatgcgcttcagcagcatgctgggccagcctggttccactcctttggac
ctcttcaagttctacgtggaagacctgaaagcccgttaccacgatgaaaaacgaataatc
aaagatatcctcaaggataaaggcttcctggtggaagtgaacaccagctttgatgacttt
ggatccgttatcagctcagacaagagagccactactctggacgctgggaacataaagctg
gccttcaacagtttactggagaaggctgaagccagagagcgagagcgagagaaggaggag
gcccgcaagatgaagcggaaagaagcagctttcaaaaccatgctgaagcaggccacgccg
ccgctggagccagaggcctcatgggaggaagtcagagaaagattcctgaaagaagctgcc
ttcgaagacgtgacgctggagtcagagaggaagaggatattcaaagatttcatgcatgtc
ctggagcatgaatgccagcatcaccattccaagacaaaaaagcattcaaagaagtccaag
aaacaccacaggaagcgatcacgctctcgatcagcgtcagagtcggaggaggaggagtac
cacaagaagaagaagcggtcccagtccaaatctccctccgagcgctcttctagtggagag
tctgagcgaagctataaaaaatccaagaagcacaagaagaaaggcaagaaaaggcgccac
aagtctgcctcgccggactccgacggtgagaagaaaggaagagagcgcgaygggaaacgg
gagcgagattcagagaaggataaagagaacgacaagactcgggggaaatctcgctcagag
tctaaacagaaatctcctaaaaggaaagcagccaaagaggagggtggctgggacacgtca
ggcagtgagctgagtgaaggagagctggagaagagaagaagaactttactggaacagctg
gatgcaccttga
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