Poecilia reticulata (guppy): 103461906
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Entry
103461906 CDS
T05149
Name
(RefSeq) tripartite motif-containing protein 54-like
KO
K10654
tripartite motif-containing protein 55
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103461906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103461906
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103461906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_6
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_2
Sina_RING
Zn_ribbon_FGT1_2
Exonuc_VII_L
UvrD_C
APP_E2
DUF4936
FAM184
Motif
Other DBs
NCBI-GeneID:
103461906
NCBI-ProteinID:
XP_008402517
UniProt:
A0A3P9Q6E9
LinkDB
All DBs
Position
LG2:complement(43787362..43799345)
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AA seq
505 aa
AA seq
DB search
MSLSADLSCLQSSQGAEREAALASLEKQLMCPICADIFSKPVVILPCQHNLCRKCANELY
QPSLFHARTTMLVNSGRFRCPTCRHDVVLDRHGVYGLQRNLLVENIIDIYKQELNQIPSP
PPLPPPLPPAEATCSDHEGEKLNIYCLTCQLPTCSFCKVFGAHQNCRVAPLTDVHQQKKD
ELSEGISSLGEFRDRVQALVSDTEDTCRAVEESFKTQKQNVCDKFSSMFSILEERRKVMT
QQIRSEEDEKVNHTQMLMRCYGDSMEANRKLLSSVESSMEELDMAEFVQNSKELISKVIA
ASGAGPSETLKPGYDSLSLYRFNFSKQEEMLRSIDFDKVVEDICEEPEVSPDPEEPKGPL
IQNTEPELCQEPLIPDRHALGEPAEEPLPPPISPPVEPLQLDELGADPEPAAPGPAAGSL
ESAGERLQPETEGPGSGDVGPGQVRVERKVERVGAEARQPVREESFRKDREGMNTQQIVT
LVFYLLALLVILLRFWSYIGCFMYL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtcggccgacctcagctgcctccagagcagccagggcgcrgagcgcgaggcg
gcgctggcgtcgctggagaagcagctgatgtgtccgatctgcgccgacatcttcagcaag
ccggtcgtcatcctgccgtgtcaacacaacctgtgcaggaaatgcgccaacgagctttat
cagccatctttgttccacgccagaaccacgatgctggtgaacagcggccgtttccgctgt
ccgacctgcagacacgacgtggtgctggatcgccacggcgtctacggcctgcagaggaat
ctgctggtcgaaaacatcatcgatatctacaaacaggagctcaaccaaataccaagcccg
cctcctcttcctcctcctcttcctcctgctgaggcgacctgttctgatcatgaaggtgaa
aagttgaacatctactgcctcacctgccagcttcccacctgctctttctgtaaagtcttc
ggggcgcatcagaactgccgggtggctcctctgacggacgtccaccagcagaagaaggat
gagctgagcgaaggcatcagttctcttggggagtttagagacagagtccaggctctggtc
agtgacacagaagacacctgtagagccgtggaggagagcttcaagacccagaaacagaac
gtgtgtgacaagttcagcagcatgttttccatcctggaggaaagacggaaggttatgaca
caacaaatccgctctgaagaagacgagaaggtaaaccacacccagatgctgatgcgttgc
tatggcgacagcatggaggccaacaggaagctgttgtcaagcgtggagagcagcatggag
gagcttgacatggctgagtttgttcagaattcaaaagaattgatctctaaagtgattgca
gcgtccggcgccggtccatccgagactctgaaaccaggctatgacagtctgagtctctac
aggtttaattttagcaaacaggaagaaatgctgaggagcattgactttgacaaagttgta
gaagacatttgtgaagaaccagaagtcagtccagatccagaagaacccaaaggaccttta
atccagaacacagaaccagaactatgccaggagccgttaatcccggaccgtcatgctttg
ggagaaccggctgaagagccacttccacctcccatctctccaccagtggaaccattacag
cttgatgaactgggagctgacccagagcctgcagctcctggcccggcggccggttcttta
gagtctgctggagaacgtttgcagccggaaaccgaaggtccaggttccggtgacgttgga
ccgggtcaggttagggtggagagaaaggtggagcgggttggggccgaggcacggcagcct
gtgagagaggaaagcttcaggaaagaccgggaggggatgaacactcagcagattgtcaca
ctggtcttctatcttttggccttactggtcatcctgctgaggttctggtcctacatcggc
tgttttatgtacttatga
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integrated database retrieval system
