KEGG   Poecilia reticulata (guppy): 103461975
Entry
103461975         CDS       T05149                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03420  Nucleotide excision repair
pret04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103461975 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103461975 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pret04121]
    103461975 (cul4a)
   03400 DNA repair and recombination proteins [BR:pret03400]
    103461975 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pret04147]
    103461975 (cul4a)
Ubiquitin system [BR:pret04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     103461975 (cul4a)
DNA repair and recombination proteins [BR:pret03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103461975 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103461975 (cul4a)
Exosome [BR:pret04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103461975 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 HAT_PRP39_N
Other DBs
NCBI-GeneID: 103461975
NCBI-ProteinID: XP_008402618
LinkDB
Position
LG3:12442779..12451295
AA seq 753 aa
MAEDTRQDKRASFSALTEHGTNGMARTSGKTGASKKLVIKNFKDRPKLAENYTEDTWLKL
RDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVRAQIHQFREESM
DNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDS
AVQKRTVEGILEQIELERNGETIDRSLLRSLLGMLSDLQVYKDSFEERFLTETNRLYAAE
GQRLMQERDVPEYLHHVARRLEEENDRIVSYLDQSTQKPLICCVEKQLLGEHMNAVLQKG
LSNLLDENRVTELALLYQLFSKVKAGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMVQDLL
DFKDKMDNVVQSCFARNEAFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATE
EELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAA
FTSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIELTVNILTMGYWPSYTPMEVHLPSE
MVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMFNEGE
EFSMEEIRAATGIEEGELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKHKLFR
IKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFP
VKPGDLKKRIESLIDRDYMERDKEIPNQYHYVA
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggcagaggacacccgacaggacaagagggccagcttctcggctctgaccgagcacggc
accaacgggatggccaggacttcaggcaaaacaggcgcctcaaagaaattagtgatcaaa
aacttcaaagataggccaaaactagcagagaactacacagaagacacgtggctgaagctt
cgagatgcagtgggtgccatccagaacagcacctccatcaagtacaacctggaagagctc
tatcaggccgtggagaacctgtgttcgtacaaagtctcccccacgctgtacaagcagctg
cggcaggtttgcgaggaccacgtgcgggcacagatccatcagttcagagaagagtcgatg
gacaacctgtccttcctgaagcgaatgaatcgctgctggcaggaccactgcaggcaaact
ataatgatccgaagcatctttctcttcctggatcgaacatatgtgcttcagaactctctg
ctgccctccatctgggacaccgggctggagctgttccgcacacacatcgtgagcgacagt
gcggtccagaaacgaacggtggaaggcattttggagcagatagaactggagcgaaacgga
gagaccatcgatcgcagtctgctgcggagcttgctaggcatgctgtcagacctgcaggtt
tacaaagactcctttgaggagagatttttgactgaaacaaatcgtctctatgcagctgaa
ggacagcggctgatgcaggagagagatgtgcctgaatacctgcaccacgtagctcgccgt
ttagaagaggagaatgatcgaattgtgagctacctcgaccagagcactcagaagcccctc
atctgctgtgtcgagaaacaacttttaggagagcatatgaacgcagttctacaaaagggt
ctgagcaatctccttgatgagaaccgtgtcactgagctggccctcctctaccagctcttc
agcaaggtaaaagcaggactgcccacgctgctgcagttttggagggactatattaagtca
ttcggtggggagatcgtttgcacaccagagaaggacaaggacatggttcaggaccttttg
gacttcaaggacaagatggacaatgttgtgcagagctgctttgcgcgcaatgaggcgttc
atcaacgccatgaaggaggcctttgaaaccttcatcaacaagaggcctaacaagcctgct
gaactcattgctaaatacgtggactccaagttaagagctggaaacaaggaggcgacagag
gaggaactggagagaatcctggacaagatcatgataatcttccgcttcattcacggaaaa
gacgtgtttgaggctttttacaagaaagatttggccaagcgtctgctggttggtaagagt
gcctctgttgatgctgaaaagtccatgctgtccaaactcaaacatgaatgtggcgcagcc
ttcaccagtaagcttgaggggatgtttaaggacatggagctgtctaaagacatcatgatc
cagttcaaacagtacatgcagaaccagagtgagccaagcaacatagaactcactgtaaac
atcctcaccatgggctactggccttcatacacaccgatggaggttcacctcccatcagag
atggtgaaactccaggaagtgttcaagctgttctaccttgggaagcacagtggaaggaag
ctgcagtggcagcccacactgggccatgctgtactaaaggcagagtttaaagagggcaag
aaggagctgcaggtttccctgttccaaactctggtgctgctcatgttcaacgaaggggag
gaattcagcatggaggagatccgtgctgctaccggaatagaggagggagagctcaggcga
acactgcagtccctggcctgtgggaaagcgcgcgtcctcaacaagaaccctcgggggaaa
gacgtggaagacggagatcgcttcaattttaacaatgactttaaacacaaactgttccgc
atcaagatcaaccaaattcaaatgaaggaaacggtcgaggagcaggtgagcaccacagag
cgcgtctttcaggacaggcagtatcagatcgatgcagctgttgtgcgcattatgaagatg
aggaaaactctgagtcataacctgctggtgtcagagctctacaaccagctcaagtttcct
gtcaagccgggagacctgaagaagcggatcgagtcgctcatagacagagactacatggag
cgtgacaaggagattcccaaccagtatcactatgtcgcctga

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