Poecilia reticulata (guppy): 103461984
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Entry
103461984 CDS
T05149
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103461984 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pret01009
]
103461984 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103461984 (pcdh20)
Protein phosphatases and associated proteins [BR:
pret01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103461984 (pcdh20)
Cell adhesion molecules [BR:
pret04515
]
Cadherins
Protocadherins
103461984 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF6899
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
103461984
NCBI-ProteinID:
XP_008402637
UniProt:
A0A3P9QAR7
LinkDB
All DBs
Position
LG3:11672195..11676404
Genome browser
AA seq
887 aa
AA seq
DB search
MFRSRYSSKRDSIWGFCILMLYTNPLSCLANFSQAKELIYKIKEGLPKGTFIGAIGVDLR
LDFTVEPPFLFSLTQKKVSEQYVNINNTTGELYTSAAEIDRETLCPYSSEEQGCFLSLDV
FVLPQQYFQLVKVKLLIEDVNDNRPKFPTDEIRMSVPENTPINGRFAVEQSAIDPDLGIY
GVQTYWLVNDFGVFTLDVEENDGGELTPFLIVTDFLDRETQAEYVTDIIAEDGGTPPLLG
AATLKIAITDVNDNCPKFTESHINVTLHGNTSKGAQLARLHAFDPDLGANAQISYAYSER
VPRDTRSLFHLDKITGGIKLARKLDFVTTTFYKLTVLANGPGCIPAVAIVTVYIIKVVAG
PPAVIPRYIAPEKDGVVTLKESEPAFSPIAFFTIKNMDKSQRVDCYLEGFGPFRLVPYQQ
LENEYLLETTETLDYERTQEYELILVANNTQGLIIKTFLKVQVLDENDNAPVFQQSLVEI
SIEENNSPNTFLTQLQASDPDSESRGEVIYILGGDTPGIFVVDRLTGVLTVATSLDREEK
EKYRFIVRAVDQGTPRRESIATVVVTVLDRNDNSPRFINKDFTFFVPENFPGYGEIGVLS
VTDPDAGKNGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAADGGVPAL
SSVTMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPDTTPGTSIAEVYAVDKDTGMNAVIAY
SIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFFVN
ETVSNESYIQSLLTRDDDIEIEEKPWYISQMTDGPERYELFPCRPILISLSVACLGLFSL
VLILISFICCKRFKKIRKKRSEVEVPLKLKNGSTNFLNRKLRQMSNI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggagcaggtactccagcaaaagagacagcatatggggtttctgcatccttatg
ttgtacaccaaccccctctcctgtctggcaaatttcagtcaagcaaaagagctcatctat
aagataaaggagggattacccaaggggactttcatcggagctattggagtggacttacgt
ttggatttcacagttgagcccccctttttattcagtctcactcaaaagaaggtcagtgag
cagtatgtgaacataaataatactactggggagctttacacatccgctgctgagattgac
agggagaccctctgtccttacagctcagaggagcagggatgtttcctttcactggacgtg
tttgtgttgcctcagcagtactttcagcttgtcaaagtaaagcttttaattgaagacgtg
aacgacaacaggccgaagttccccacagatgaaatccgcatgtctgtcccagaaaacaca
ccaataaatggccgttttgcggtggaacagtctgctattgacccggacctggggatttat
ggagtgcagacctactggctggttaacgactttggtgtgttcactctggatgtagaggag
aatgatggaggtgagctgacaccgttcctcattgtgacagactttttagacagagagacg
caagctgaatatgttacagatatcattgcagaagacggagggacccctcctcttcttgga
gcagcaactttaaaaatcgccatcacagacgtaaatgacaactgccctaaatttacagag
tcacacattaatgtcactctgcacgggaataccagcaaaggggcacagttggcacgtttg
catgcttttgaccctgaccttggtgctaatgcacagatcagctacgcttacagtgaacgt
gtgccaagggacaccaggagcttgttccatttggacaaaattacaggggggatcaagcta
gccaggaaactagactttgtcacaaccacattttacaaactaactgttctggccaatgga
cctggctgcatccctgccgttgcaattgtaaccgtgtatatcatcaaagtggttgcagga
ccccctgctgtcatacctagatatatcgcgcctgaaaaggatggagtggtgacattaaag
gagtctgagccagctttttctccaatagcattttttactatcaaaaacatggacaaaagc
caaagggtggactgttatttggaagggtttggtcccttcaggcttgtcccataccagcag
ttagaaaatgagtatttactagaaacaacagagaccttggactatgagaggactcaggaa
tatgagctaattctggttgctaacaatacccaaggtctaatcataaagactttcctaaag
gtgcaggttttggatgagaacgacaatgcaccagtgtttcaacagtctttggtggaaata
tcaattgaggaaaataattcaccaaacacattcctaactcagctccaagcctcagaccca
gacagtgaaagtcgaggggaggtaatctacatcctgggtggggatactcctgggattttt
gttgtggatcgtctgacgggggttttgactgttgcgacatcgcttgacagagaggaaaaa
gaaaaatatcggttcatagttagagcagtagatcaggggacgcctaggagggagtcaatt
gctacggtggtggtgactgtgctggaccgcaatgacaacagtccacgtttcattaacaag
gattttaccttctttgtgccagagaactttcctggatatggggaaattggtgtcctctct
gtgacggatcctgatgctggtaagaatgggtgggtagccctgtccatccttaatggcagt
gacatttttatgatagacactggccgaggtgcactgagggccaagacatccctagaccgt
gagcagcaaggcacgtaccagctgtggattgaggccgctgacggtggggtgccagcgctt
tcctctgttactatggtgactgttctcttgttggatgtgaatgacaacccgccagttgtt
cttttccctcagtccaaccagtcctacatgctggtgctacctgatacgacacctggaaca
tcaatagcagaagtgtacgcagtggacaaagacacagggatgaatgctgtgattgcctac
agtatcattaaaaggaaagggggtgagccagggtcatttgccatcgacccagaaacgggg
aacataacattaaagagagagctcagcaacagggggctttacagccttctagtgaaagtt
agtgatcacggtcaacctgaaccgctttactcaacggtcatggttaacttctttgtcaat
gaaacggtgagtaatgagagttacatccaaagtctgctgaccagggacgatgacatagaa
attgaagagaagccctggtacatcagtcagatgacagatgggccagagaggtatgagctg
ttcccctgtcggcccatcctcatcagtctttcagtggcgtgtctcgggttgttttccctg
gttctcatattgatatcatttatatgctgcaagagattcaaaaagataaggaagaagaga
tcagaagtggaagtacctttaaaattgaaaaatggctcgacgaactttctgaacagaaaa
ctcaggcagatgtcaaacatctga
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