Poecilia reticulata (guppy): 103462144
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Entry
103462144 CDS
T05149
Symbol
neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04350
TGF-beta signaling pathway
pret04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103462144 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103462144 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103462144 (neo1)
Cell adhesion molecules [BR:
pret04515
]
Immunoglobulin superfamily
DCC/UNC5 family
103462144 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
Ig_Rha78A_N
fn3_2
Tissue_fac
C2-set_2
Fn3_Dep-1_3rd
Sp38
GH101_dom-5
V-set_CD47
EphA2_TM
FAM176
DUF4912
DUF7472
Motif
Other DBs
NCBI-GeneID:
103462144
NCBI-ProteinID:
XP_008402929
LinkDB
All DBs
Position
LG3:complement(7386000..7596263)
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AA seq
1523 aa
AA seq
DB search
MAERGALALLSLLCLTFLFTETNAAKHVDKGSAAQPFSPFWFTVEPQDTLAIRGNTALLN
CSAHSDEASPTRIEWKKDGTFMSLVSDERRRVLPDGSLFFTNVVHSKHNKPDEGTYQCVA
NIENVGSISSRTARLAVAGIPRFASQPSAASVHVGDSQVMACEVNSDLVPFTRWEKDKEA
LELSDRLIQLPSGALVISNASETDAGLYRCVVENVGSSKSSDEAPLQTIPEPGVERKLEF
LVQPASVARLLGAGVLLPCVATGYPPPHIRWMFGDKVLEESDGRVEVTGGGSLQISNITE
EDGGVYTCVAENSNTTIEAQAQLTVQVPPQFVKRPANVYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPAFPPPSLTPNTTDHVTAGSGGVAAAAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDDLTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNSPTSFFLSWDKPLTGNGEILSYKLYYTDRSVGTEEDV
DIDGQSYTMAGLKKNTEYSFRVVANNKHGPGVSTEDVMVRTLSDVPSAPPQNLTLEVQNS
KSIMVRWQPPPLSGQNGEITSYKIRYRKVPRRSESAVTTAGTELYKLIDGLEPGTEYSFR
VSAVTVNGTGPATEWVPAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTISYGIGSPHAQTIKVDYKQRYYTIENLNSGSHYVITLKAFNNVGEGIPVYESAATR
VQSDPIDPDVDLYELFHAPYTPAPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKI
TDNRHYTVRWKTNIPANTKVKMANSTSLSHVVTGLKPNTLYEFSVMVTKGRRASTWSMTA
QGTTFETIPSSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEPVQFRTPKTESSDKMANDQA
LNIPPKPGPSGNLYPIVPRNSDGKIGPRNENLTVIIVSIIAVGVFTTIVVVVGALLCTRR
STSQQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTETPI
PRTSQDITPADSGLESNPHLQQRRNSYRGHESDDSMSTLAGRRVMRPKMMMPFDAQPPQP
VISAHPIHSLDNHHHHYHMGSLVSPTRSYLYHQGSGYPRPHACATPISHLERVDSSESVR
NTPSSEPLPPPTASSQVSCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRPAHPHAHAH
PLKSFAVPAIPVSGHPSYESPALPSTPLLAQTGEHSLQTYPESVYHQWPPTHPHVVKTAS
IGTLGRTRTPMIVTVPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPIPLPQSYEPD
ELTEEMAHLEGLMKDLNAITTAP
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctggcgctcctctctctcctctgtctcacctttctcttcacg
gagaccaacgcggcaaagcatgtcgacaaaggctcagcagcgcagcccttcagccccttc
tggttcacggtggagccccaggacacgctggccatccgggggaacacggcgctgctcaac
tgctcggcgcacagcgacgaggcctcgccgacgcggatcgagtggaagaaggacggcacc
ttcatgagtctggtctcggacgagaggcggcgcgtcctcccggacggctcgctgttcttc
accaacgtggtccattcaaagcacaacaagccggacgagggcacgtatcagtgcgtggcc
aacatcgaaaatgtgggctccatctccagccgcacggcgcggctcgctgtagcagggatt
ccccggttcgccagccagccgtcggcggcctccgtccacgtcggggacagtcaggtgatg
gcgtgcgaggtcaactcggacctggttccgttcacgcgctgggagaaggacaaggaggcg
ttggagctgagtgacaggttgatccagctacccagcggggccctcgttatcagcaacgcc
tcggagacggacgccggcctctatcgttgcgtcgtggaaaacgtgggctcctccaagtcc
agcgatgaggccccgctgcagaccatcccagaacccggagtggagaggaagctggagttc
ctggtgcagcctgcgtctgtggccaggctgctgggcgccggcgtgttgctgccgtgtgtg
gccacaggttaccccccacctcacatccgctggatgtttggagacaaagtgctggaggaa
agcgatggtcgtgtggaagtgacgggaggcggcagcctccagatttccaacattacggag
gaagatggaggcgtgtacacctgcgtggccgaaaactccaataccaccatcgaagcccag
gcccagctcacagttcaagttcctccccagtttgtgaagcggcccgccaacgtctacgcc
cacgagtccatggacatcgtcttcgagtgcgaagtttcgggctcgcccgcccccaccgta
aagtgggtcaagaacggagacgccgtcatccccagcgactatttcaagataattaaggag
cacaacctgcaggttctgggtctggtcaagtctgacgaaggtttctaccagtgcctggca
gaaaacgatgccggcaacatccagtcgagcgcgcagctcatcatcttggatcacgacgta
gccctgcccgccttcccccccccttcactgactcctaacactactgaccatgtaacagca
ggctccggaggcgtggccgcggcggcggggcccaccccctccgcgccgcgggacgtcgtg
gcttccctggtctccacccgcttcatcaagctgacgtggcgccagccggccgagccgcat
ggagatgacctgacctactccgtgttctacagccaggagggcaccagcagggagcgggtg
gtgaacaccagccgaccaggagaaatgcaggtcaccatccagaacctgatgccagacacc
aagtatcgcttcagggtggtggcgcacaacagcaatggccagggcgagagctcagcagca
ctcaaagtggccacccaagctgaagtacaagtgccgggtccagcgcccaacctgcaggcg
gtgtccaacagtccgacctccttcttcctcagctgggataaacccctcacaggcaacggg
gagatcctctcctacaagctctactacacagacagaagtgttggcaccgaagaggatgtt
gacatagatggccagtcatacaccatggctggactgaagaagaacacagagtacagcttc
cgcgtagtggccaacaacaagcacggcccgggggtctccacggaggacgtcatggtccgg
acactttctgacgttccaagcgcccctcctcaaaacctcaccttggaggtccagaactca
aagagcatcatggttcggtggcagccgcctccgctcagcggccagaatggggaaatcacc
agctacaagatacgctaccggaaagttccacggaggagcgaatcagctgtgaccactgct
gggacggagctctacaagctcatcgatggtctggagcccggaaccgagtactccttccgc
gtgtcggccgtgactgtgaacgggaccggaccggccaccgagtgggtcccagcagagacg
tttgagagcgacctggacgaatctcgcgtaccggaccagcccagctcgctgcacgtccgc
ccgctggtcaacagcatcgtggtgagctggacgccgccagagaatcaggacatcgtggtg
cgcggctacaccatcagctacggcatcgggagcccccacgctcagaccatcaaagtggac
tacaagcagcgctactatactatcgagaacctcaactccggctcccactacgtgataacg
ctgaaggccttcaacaacgtgggggaggggatccccgtgtacgagagcgcagccaccaga
gtgcagtcagaccccatagaccccgatgttgacttgtacgaactgttccatgctccatac
accccagcacccgaccccagtcccatgatgcctcccgtgggcgtgcaggcctccgtgctg
agccacgacaccatcaaggtgacgtgggccgacaactcgctgcccaagaaccagaagatc
acagacaaccgccactacaccgtgcgatggaagaccaacatccccgctaacaccaaagtg
aagatggccaacagcacaagcctgagccacgtagtgacaggcctgaagcccaacacgctt
tacgagttctccgtcatggtgaccaagggccgccgcgccagcacatggagcatgaccgct
caagggaccacctttgagaccatccccagctctgccccaaaagacgtgacagtggtgagc
aaagagaacaagccacgcaccataatagtcaactggcagcctccctctgaagccaatggg
aagattaccggttacattatctactacagcacagacgtcaacgcggtggtccacgactgg
gtcatcgagcctgtggtggggaaccgcctcactcaccagatccaggagctgactctggac
acgacgtactacttcaagatccaggccaggaactccaaaggaatggggcccatgtcggag
ccagttcagttcagaactcccaagactgagtcctctgacaaaatggctaatgaccaagct
ttaaatatcccaccaaagcccggaccttcaggcaacttgtatccaattgtccctcgaaat
tcagatggtaaaataggtccgagaaatgagaatctcaccgtgatcatcgtcagcataatc
gcagtgggagtcttcaccaccatagtggtggtagtgggagccttactgtgcacgcggcgc
agcacgtcccagcagaagaaaaagcgagcggcctcgaagtcatccaatggctcccataag
tacaagggaaactccaaagacctgaagccgccggacctttggattcatcacgagaggctg
gaactgaaacccatagacaagtcgccagaacccaacccggtcatgaccgagacgcccatc
cctcgcacctcgcaggacatcacccccgccgacagcggcctggagagcaacccccacctg
cagcagaggcgcaactcctaccgaggccacgaatcagacgacagcatgtccacactcgca
ggccgccgggtgatgaggcctaaaatgatgatgccttttgacgctcagccaccccagccc
gtgattagtgctcaccccatccattccctcgataaccatcatcaccattatcacatgggc
agcctggtatcaccgacacgcagctacctctaccatcaaggcagcgggtacccgcgcccg
cacgcctgcgccacccccatctcccacctagagagggtggactcttcagagtccgtgagg
aacacgccgagttcggagcccctccccccacctaccgcctcctcccaggtctcctgccct
tccgagatcatggctgacccggagggcagctaccacggctccaccaccactgaggaagag
cccagctactccagcaacctgccgccacaccggccagcccacccgcacgcccatgcccac
cccctcaagagcttcgccgtgccggcgatcccggtctccggccatccgtcgtacgagtcc
cccgccctgcccagcacgcctctgctcgctcagaccggtgagcactcgcttcagacatac
ccagagtctgtttaccaccagtggcctcccactcaccctcacgttgtaaaaacagcctcc
attggaacactagggagaacgcgcactccaatgatcgtaacggtgcccaacgcccccgat
gtaccagagacgagcaaaatgctggaggacgtggacagcgtgcttgcctccctgccccct
tgcccctccccggcccctcgcagtaaccctattcctctccctcagagctacgagcccgac
gagctgaccgaggagatggcgcacctcgagggcttgatgaaagacctgaacgccatcacg
acagcaccatga
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