Poecilia reticulata (guppy): 103462358
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Entry
103462358 CDS
T05149
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pret02000
]
103462358 (tmc3)
03037 Cilium and associated proteins [BR:
pret03037
]
103462358 (tmc3)
Transporters [BR:
pret02000
]
Other transporters
Pores ion channels [TC:
1
]
103462358 (tmc3)
Cilium and associated proteins [BR:
pret03037
]
Other cilia and associated proteins
Stereociliary proteins
103462358 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF2254
Orf78
Motif
Other DBs
NCBI-GeneID:
103462358
NCBI-ProteinID:
XP_008403303
LinkDB
All DBs
Position
LG3:13294591..13415521
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AA seq
1156 aa
AA seq
DB search
MSSASELVVGSSRSLLAAKRHRTVRKNSRRIYSAYRDHQQGSSDEEGGDDKEVDSNDPEE
MFQNIQYQKEIIANIRSRPWPMRRKLKVLKQAREIVLKYEGQLTRTRGYQTAGADLLKKL
YRVLYNIVVTFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGSFVVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGSVRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLVSASDENFTFCWRVFCAWDYLIGNPEAAECKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSTPHESSSNWTNTSSTISSLSAQVPRISVSEHRNSTMATISTAINFV
HNRSSLVIAYNQTIPFEKNARSQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGL
VVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGL
MYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSEHCGPFS
GQEKIYDIISDTVASDFPLWFSKVMSYVTSPVVVLPAVLLLFMLIYYLQAIARSLKFTNN
QLRIQLQTERTEDKKKVFQMAAARLQTPEASADKNPDQQESDIPSHEASIHTSSSQQNGS
VTNVQSPINHSDSIRTITQSASGADLNEGHVSESVRRPAVIVLPKHQVEPLPNSRPRHFI
GGQSGSCRSKSCHHMAYNPPSGLSNAIHTDPLYRKTIRSLHPVEAAGIIAAQNYGGRRGP
TTRYVIVNEHRPRRKLLCSATRIPRHYLMEEPTEILELYPRNIKHYTPRTNPQHPPRSHT
SQQLRKEEEETGKDRKRTSLGKSLRPCSLPDHHQQAHFYIGERLDSFRESQRARNEIQKD
DEEEAGKEGVDWGDFNLPSPSQASIKEKVCFHTQRHPVHSPRRQHQSPTRSRHMGSQLKP
KLRGQLETHLTESDSASIASSSDQQNSSTDQYIQVIHSKERHLGSDVRQEKVSKKKTKAN
FDINYTESNDLICSNV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcatctgaacttgtggttggaagcagtagatccttgcttgctgccaaaaga
cataggactgtacgaaagaactcaagaaggatttattctgcttaccgagaccaccagcag
ggctcatcggatgaagaaggtggagatgataaggaagtggacagcaatgaccctgaagaa
atgttccagaacattcagtaccaaaaagagatcatcgccaacattcgctccagaccctgg
ccaatgagacgcaagctcaaagttttaaagcaggctcgagagattgtcctaaagtatgaa
ggccagctgacaagaacacggggttatcagaccgccggagctgatctgctgaaaaaactt
taccgtgtgctttacaacattgttgttacattcattccgtgggaagtgaggatcaaaaaa
attgaaagtcactttggatcaggcgtggcctcctattttatctttcttcgctggttgttt
gggataaacatcgtcctcaccatcatgacaggatcttttgtggtcctaccagagctgttg
gctggagctccatttggaacaacaagaagtaaaactatccccaaagagcatcttgcatca
gctcaagacttggacaccatctggtctcttgggggttacctgcagtactctgttttattc
tatggttattatggcagcgtgaggaagattggcagtgctggctaccggcttccacttgca
tacttccttgttgggatggctgtttttgcctacagtttcatcatcctgttacgcaaaatg
gcaaagaactctcgtctgagtctggtcagtgcttctgatgaaaacttcacattctgttgg
agagttttctgtgcctgggattacctgattggtaacccggaagctgcagagtgcaaagga
gctgcaatcgtcaacaacatcagggaagcaattgttgaagagcaagaaaagaagaaggat
acgagcctggcagttctcatcagtctgcgtattttagccaatatcctggttttgctgtca
ctagctgggagcatctacatcatctattttgtggtggaccgatcccagaaactggagcag
gaaaagccagagctgacgttgtgggagaagaatgaggtgagtgtggtggtctcgctcatc
actatgattgccccttctgcttttgagctggttgcccagctggagatgtaccacccaaga
acctctctgagattccagctggccagagtccttgttctatatctgggaaacctctacagc
ctcattattgccctcttggataaagtcaacagtatgagctctactcctcatgagagttca
agtaactggactaacaccagctccaccatatccagtctctctgcccaagtaccaaggatc
tctgtgtctgagcatcgcaacagtactatggcaaccatcagcacagcaatcaacttcgtc
cacaacaggagcagcttagttattgcatacaaccagacaattccttttgagaaaaatgca
cgatctcaacaggaccagtgctgggagacctatgttggacaggagatgttgaagctttct
attattgacatgatcttcacagtggccagcatcttgctcattgactttatcaggggcctg
gtggttcgctatctgagtgactgctgctgctgggacttagaaagcaagtttcctgaatat
ggagaatttaaaatagctgaaaatgtcctacacttgatttacaaccaaggaatgatctgg
atgggagcctttttctctccatgccttcctgcctttaatgtgttgaaactgattggtctc
atgtatctaaggagctgggctgtcctcacttgtaatgttcctcatcagcaggttttccga
gcttccagatcaaataatttctacttggctatgctacttttcatgctgttcctgtgtatg
ctccccaccatctttgccattgtgcgatatagaccatcggaacactgtggaccattcagt
ggccaggagaagatttatgacatcatctcagatacagtggcatcagacttcccactttgg
ttcagtaaagtgatgagttatgtcaccagccctgttgtggtgctgccagcagtgctactg
ctatttatgctgatatattatcttcaagccattgccagatccctaaaatttaccaacaac
caactgaggattcagctccagactgagcggacagaggacaagaaaaaagtgtttcagatg
gctgcagcaaggctgcaaaccccagaggcctcagctgacaaaaacccagatcagcaggaa
agtgacatcccaagccatgaagcttccatacatacctcatcttcccagcaaaatggcagc
gttacaaacgttcagtctcctattaatcatagtgacagtatccgtaccatcacccaatca
gcttcaggagctgacctgaatgaaggacatgtgtctgaatctgtcagaagaccagctgtg
atcgtactacccaaacaccaagtggaacccttaccaaacagtagacctcgacatttcatt
ggtggccaaagtggttcctgcagatccaagtcttgccaccacatggcatataatccacca
tctggcctttctaatgcaatccacactgaccccttgtacaggaaaaccattcgttctcta
caccctgttgaggctgctggaatcattgctgcccaaaattatggggggcgccgtggtccc
actacccgctatgtgattgtcaatgagcacaggccccgtaggaagctactgtgctcagcc
acacgaatcccaaggcactatctcatggaggagcccacagagatcctagagctatacccg
cgcaacataaaacactacacacctcgcaccaatccccaacatccccctcgctcccacaca
tcacagcagctcaggaaagaggaggaagaaactggaaaagacaggaaaaggacttcttta
ggcaaaagccttcgaccttgttcattgcctgaccaccaccaacaagcgcacttctacatt
ggtgaaaggttagatagttttagagaaagtcaaagagcaaggaatgagattcaaaaagat
gatgaagaggaagctggtaaagaaggagttgactggggagatttcaacttaccgtctccg
tctcaggccagtataaaagaaaaagtatgttttcacacacaaaggcatcctgtccattct
ccaaggagacagcatcagtcccccaccagaagcagacatatggggtctcaattaaagccc
aagttaaggggtcagcttgaaactcatctaactgaatctgactcggcctccatagcctcc
agcagtgaccaacaaaacagcagtactgatcaatatattcaggtcatccacagcaaagag
cgccatctaggatctgatgtcaggcaagaaaaggtgtccaaaaagaaaaccaaggcaaac
tttgatataaactacacagaatcaaatgacttgatctgttccaatgtgtaa
DBGET
integrated database retrieval system
