Poecilia reticulata (guppy): 103462539
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Entry
103462539 CDS
T05149
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103462539 (ctcf)
03036 Chromosome and associated proteins [BR:
pret03036
]
103462539 (ctcf)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103462539 (ctcf)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103462539 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-met
Actin_micro
LIM
zf-C2HE
zf-C2H2_6
zf-C2H2_15
DTHCT
zf-WIZ
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
103462539
NCBI-ProteinID:
XP_008403632
UniProt:
A0A3P9MWI6
LinkDB
All DBs
Position
LG3:complement(20100117..20108871)
Genome browser
AA seq
760 aa
AA seq
DB search
MEGEVVSMESAQAAALASDGKVLPEGGEALIQAAQGEVAGDMNMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATFVE
ASGANKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQATQEEEEEDEE
VIEPEAAVPQQEDPEWSKDPDYQPITAIRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCD
AVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFR
QKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHAENCMGEAGGDENGDPSPKK
GRRGRKRKMQSRRDDDDDDDDDDDENTEGELDEVEDEEDEMLNEIEVEQAEPVVPIPAPV
EPPVKRKRGRPPKNKPDPAAIIRVEDEVTGEVDDIIVKKEVGAEQEEGAMEEVVVGGVKS
TIQLEELSQVEGAAAAEVQMSEAPPNGDLTPEMILSMMDR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggtcgtttccatggagtcggctcaggccgccgccctggcctctgatgga
aaggtcctaccggagggcggagaggctctgatacaagcggcgcagggagaagtggccggt
gacatgaacatgatggtgatggacgctctggatcccactctgctgcagatgaaaacagaa
gtgttggagggaggcggcacagtgacggttaccgggggagacgagggtcagatcatcaca
cttcaggtggtgaatatggaggagcaggccggtgccgcattgggtctcggtcagcttcag
ctggtccaggtcccggtcacaacaacaactgtggaggggctccaggccacttttgttgag
gcgtcaggagctaataaggatgcagaaccggttatctgtcacacccttcctttgcccgaa
ggcttccaggttgtaaaagtgggagcgaatggtgaggtggagactgtagagcaggaagag
ctccaagcggctcacgatgagctccaagcaacacaggaggaggaagaggaggatgaggaa
gtgattgaacctgaagctgctgtccctcagcaagaagacccagaatggtcaaaggatcca
gattaccagcccatcactgctatccgcaaagggaaaaagggcaaaaagagccgacttcgg
tatgcagagggagatcgggacatggatgtttctgtgtacgactttgaggaagaacagcag
gaggggctcctgtcagaggtcaatgctgagaaggtcgtgggcaacatgaagcctccaaag
cccaccaagatcaagaaaaaaggtgtgaagaaaactttccaatgtgagctctgcagctac
acctgtccaagacgttctaatctggatagacacatgaagagccacactgacgagcggccg
cacaaatgtcacctgtgtggcagagccttcagaaccgtcacgctgctgaggaaccacctg
aacacacacacaggcacccggccacacaaatgcacagattgtgacatggcctttgtgacc
agtggagagttggtgcgccatcgtcgctacaaacacacacatgagaaacccttcaagtgt
tcaatgtgcgactattccagtgtggaggtgagcaagttgaaacggcacatccgctctcat
actggggagcggccgttccagtgcagcctttgcagctacgccagcagagacacctacaag
ctgaaaagacacatgaggacacattcaggggagaagccgtacgagtgctacatctgccac
gcccgtttcacacagagcggcaccatgaagatgcacattctgcagaaacacacagaaaac
gtggccaagttccactgcccccactgcgatacggtgatcgctcgcaagagcgatctaggt
gttcacttgcggaagcagcactcgtttatcgagacggggaagaaatgtcgttactgcgac
gccgtgtttcatgagcgctacgctctgatccaacaccagaagactcacaagaacgagaaa
cgtttcaagtgcgaccagtgtgattactgctgcagacaggagcgccacatgattatgcac
aagcgtacacacacaggggagaagccatttgcctgtagccagtgtgagaagactttccgt
cagaagcaacttctggatatgcacttcaagcgttaccatgatccaaactttgttcccact
gccttcgtctgcagcaagtgtagcaagaccttcactcgcaggaacacaatgctgcgtcac
gcagagaactgcatgggtgaagctggtggagacgaaaatggagacccgtctcccaagaag
ggacggcgtggcagaaagaggaagatgcagagcagaagggatgatgatgatgatgatgat
gacgacgacgacgaaaacactgagggagaactggatgaagtagaagacgaggaagatgag
atgctaaacgagatcgaagtcgaacaagccgaaccagttgtcccaattcctgcaccagtt
gaacccccggtgaagaggaaacgtggacgccccccgaagaacaagcctgaccccgctgcc
atcatccgtgtggaggatgaggtcacaggggaggtggatgacatcatcgtgaagaaggag
gtcggtgcggagcaggaagagggcgccatggaggaggtggtggttggcggcgtcaagtcg
actattcagttggaggagctgtctcaggtagaaggagcggcggcggcggaggtgcagatg
agcgaggccccacccaacggagacctgacccctgagatgatcctcagcatgatggaccga
tga
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