Poecilia reticulata (guppy): 103462700
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Entry
103462700 CDS
T05149
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103462700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103462700
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
103462700
REST complex
103462700
Heterochromatin formation proteins
Other heterochromatin formation proteins
103462700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
103462700
NCBI-ProteinID:
XP_008403863
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All DBs
Position
LG3:23058661..23074224
Genome browser
AA seq
1293 aa
AA seq
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MKRRAEDPEPIFVQQQPRRPPVQAIGEGFQRALVPAPPVVEAAADTMQPSTGIQYSLPQA
YQVPTMPQSTSGHGHNNATPHIGPHTHSLAVQAQGPAVVPGHVHPPTPIASVQGQQQQQQ
FQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPD
LIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPQGISVQNIPATGGPSQPTSLQQHQ
SLPQTSPHTTTTPTIATQPALNKASKQLIQSPAHTPTSQPNPSIPSYASPRSPSVQPHTP
VSSTPSSGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA
GGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSVLLGKSPPDRAESVRNDHG
PTVKRPSLNNKQRLNQNGLPIRRPAGVGSTPPFKKKALVIGKAHGMAEVGKLNTSTETMF
FEKVKKALRSSEAYDNFLRCLHIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLGYRE
SSHGELSHAESLPKERSTEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCREVL
NDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDIVLENNLATIRALETVQKRLS
RMSAEEQLRFRLDNTMGGSSEVIHRKAIQRIYGDKAPDIIDGLKRNPAVSVPIVLKRLKM
KEEEWKEAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIEMLYEDRQ
ERASEETAAPPPSGPHMTQTYDDSQILEDAAALIIHHVKRQVGIQKEDKFKIKQIINHFI
PDLLFARRGELSDLEEEEEEEEEEEEMETNQDSPKKHNGLPGRSPSKSKLLFSNTAAQKL
RGTDDAYNLFFVNNYWYVFFRLHHILCSRLLRIYGQAEKQIEEETREREWEKEVLGLKRD
KNENPAIQLKMREPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYIAFT
MDKLIQSIVRQLQHLVTDDICVRVTDMYLTESAKKATGGAVSTQTSRATAEGAYQRKAEQ
LMTDENCFKLMFTKNRGSVSVAMELLDTEEENSDEPTDAEKWSDYVSRYLNSDSASPELR
EHLAQKPVFLPRNLRRIRKCQRGWEQLQQERITKGSSDKSQDGSSELKMECMFKLNSYKM
VYVCKSEDYMYRHTALSRAHQSHQRVNTHLHGRFQTWLDSWAQKHVTPEMATNTHKWLMG
DVEEGLLSCTTTCSPEVLHYLNINKYRVQYRTL
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgtgcagaagatccagaaccgatttttgtgcagcagcaaccacgccgtccc
ccagttcaagctattggagaaggctttcaacgggcccttgtcccggccccacctgttgtt
gaggctgctgcagacaccatgcagccctcaactggtatacagtactctctgccccaggcc
taccaggtgcctactatgcctcaaagcacaagtggacatgggcacaacaatgccacacca
catattggccctcatacacatagcctggctgtgcaggctcagggacctgcagtggtccca
ggtcatgttcatccccccacacccatagcttcagttcaaggacagcagcagcaacagcag
tttcagcggttaaaggttgaagatgccctgtcttatctggatcaagtaaaactgcagttt
gggaatcaacctcaagtttataatgattttctcgacattatgaaagagtttaaatcccag
agcattgacactcctggagtcattaaccgtgtgtcgcagctatttaagggccaccctgac
ctcatcatgggttttaacactttcctgccgcctggttataaaatcgaggttcaaaccaac
gatctggtgaacgtaactacacctggtcagatacactacattactcctcaaggaatatcg
gtacaaaacatcccagcaactggaggacctagccaaccaactagcctccaacaacaccag
agtctcccacagaccagcccgcacaccaccactaccccaactatcgccactcaacctgct
ttaaacaaagccagcaagcagcttattcagtctccggcccacacacccaccagccagcca
aatccatccatcccgtcgtacgcctcaccacgttctccttcagttcagccccacactccg
gtcagcagcaccccatccagcgggccacctctccagaacaaccaacctgtggagtttaac
cacgccataaattatgtcaacaagatcaagaaccgcttccagggccagccggacatctac
aaggcctttctggaaatcctgcacacttaccagaaagaacagcggaatgctaaagaggct
ggggggaattacacaccagctctgactgaacaggaggtttacactcaagtggccagactt
tttaagaaccaagaggacctactgtcagaatttggacagttcctgccagatgcaaacagc
tcagtgttgttggggaagagtcctccagacagagcagagtcggtccgtaatgatcacggt
cccacagtaaagagaccctcgctgaacaacaaacagagactgaaccaaaatggtctgcca
atcaggagacctgctggagtgggatccacaccacctttcaagaaaaaggcgcttgtcatc
ggcaaggcccacggcatggctgaagtcggtaaactcaacacaagcactgaaactatgttc
tttgagaaggtgaagaaggctctacggagctcagaggcatatgacaacttcctccgatgt
ctgcacatcttcaaccaggaagtgatttctcgcactgagctggtccagctagtcatcccg
tttcttggaaaattcccagagctttttacttggtttaagaacttcttgggctaccgtgaa
tctagtcacggggagctgagccacgcagagagtttacccaaggagcgttcgacagagggc
atcgccatggagatcgattatgcttcctgcaagaggctgggatccagctacagagcactg
ccaaagagctatcagcagcctaagtgcacaggaagaacaccactgtgcagagaggttttg
aatgatacatgggtgtcttttccatcctggtcggaggattccacatttgtgagctccaag
aagactcaatatgaggagcatatttacagatgtgaagatgagcgctttgagctggacatt
gtgttggaaaacaacctcgccacaatacgagccctggagacggtgcaaaagaggctctcc
cgcatgtcggctgaggagcagctgcgattcaggctggacaacacgatgggcggctcttcc
gaggtcattcaccgcaaagccattcagaggatatacggagacaaagctcccgacatcatt
gacggcctcaagagaaaccctgccgtgtctgtacccatcgttctgaaaaggttaaaaatg
aaggaagaagagtggaaagaagcacagagagggttcaacaaaatctggcgggaacagaat
gagaaatactacttgaagtcacttgaccaccaaggcataaacttcaaacagaatgacacc
aaagtgctgcgctccaagtctttacttaatgaaattgagatgttatatgaagatcgccag
gagcgcgcctcggaggaaaccgccgccccgccccccagcggccctcacatgactcagacc
tacgacgatagccagatcctggaggatgccgccgctctcatcattcatcacgtcaaaaga
caagtgggcattcagaaagaagacaagttcaagatcaaacagatcatcaatcatttcatc
cccgaccttctgtttgcgcgacgtggcgagctctccgacctggaggaagaggaggaggag
gaggaggaggaagaagaaatggagacgaaccaagacagccccaagaagcacaacggcctg
ccgggccgcagcccatccaaatccaagctcttgttctccaacacggcagctcaaaaactg
cggggcacagacgacgcttacaacctgttttttgtgaacaactattggtatgtgttcttc
cgccttcatcacatcctctgctcccgtttgctgcggatctacgggcaggccgagaaacag
attgaggaggaaacccgggagcgagagtgggaaaaggaagtgctgggcctgaaaagagac
aagaacgaaaacccagccatccagctgaagatgagagagccgatggatgttgatgttgaa
gactactactccgtgtttctggaaatggtgcgaaatcttctggacgggaacatggagccg
gctcagtacgaggactccctgagggaaatgtttaccatccacgcctacatcgccttcacc
atggacaagctgatccagagcattgtccggcagctccagcacctcgtcaccgatgacata
tgcgtgcgtgtaacggacatgtacctgactgaaagtgccaaaaaagctacagggggcgct
gtttccacacagacgtccagagctacagcagagggggcctaccagcggaaagcggagcag
ctgatgacagatgaaaactgcttcaagctgatgttcacgaagaaccgaggatctgtgagc
gtggcgatggagctcctggacacagaagaggagaactctgatgagccaacagatgcagaa
aaatggtcagactacgtgagcaggtacctgaactcagattctgcttctccggagctacgt
gagcatttggcccagaaaccagttttcctccccaggaatctgagacggatacggaaatgc
cagagaggatgggagcagctgcagcaagaacgcatcactaaaggctcctctgacaagtcg
caggatggcagcagtgagctgaagatggagtgcatgttcaaactaaactcctacaaaatg
gtttacgtctgcaagtcagaggactacatgtacagacacactgcgctttcaagagctcat
cagtcccaccagcgggtgaacacacatctgcacggccgcttccagacttggctggactcc
tgggcccagaagcacgtgacgcctgaaatggccaccaacactcacaagtggctaatggga
gatgtggaagagggactgttgtcatgcaccaccacctgcagccccgaagtcctccactat
ctcaacatcaacaagtaccgggtgcagtacaggacactgtag
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