Poecilia reticulata (guppy): 103462892
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Entry
103462892 CDS
T05149
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103462892
03036 Chromosome and associated proteins [BR:
pret03036
]
103462892
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103462892
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Pre-60S particles
Helicases
103462892
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103462892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GUCT
Helicase_C
DD_DDX21-DDX50
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103462892
NCBI-ProteinID:
XP_008404155
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All DBs
Position
LG3:complement(31048542..31057261)
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AA seq
385 aa
AA seq
DB search
MAVAINEHSVNXPLVSCDHVSSLRLFRSFPSACXRLACVHVEGLQQGREMPSKIIFETEE
ETTEKDMDTVAEAETFKSSQSLHGDIPQKQRETTLKGFRNGVFEVLVATNVAARGLDIPE
VDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGV
PTANDIIKSSSKDATRFLDSVPATAVEYFRESAEKLIKEKGAVDALAAALAHISGATSLE
QRSLLNSDAGYTTMQLQCSQEXHNLGYAWRTIKEQLGEDFENHIHRMTFLKGKTGVCFDV
PANKVKEIQDNWKDGRRWQLTVATELPELEEKQFPNRGDRGGFRGGRGRGFGGNGGRNGG
FRSGGGGGXNNRGGHKRTFNHAFDY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgccattaacgaacattccgtgaacgytccactcgtcagctgcgatcacgtt
tcttcgctccgcctcttccggtcctttccatccgcgtgcyctaggttagcctgtgtccac
gtcgagggtctccaacagggaagagaaatgccgtcaaaaatcatytttgaaactgaagaa
gaaaccaccgagaaagatatggacaccgtcgcggaagctgaaaccttcaagagttcccag
tccctccatggggatattccacagaaacagagagagacgactctgaaaggtttcaggaat
ggtgtctttgaggtccttgttgccacaaacgtcgccgcccgtggattagacatyccagag
gtcgacttggtggtccagtgttctccgccgaaggatgtcgagtcctacatccatcgttca
gggcgaacaggacgagcaggcaggactggcgtctgcatctgcttctaccagaggaaggaa
gaggaccagttgcgctacgtagagaacaaagccggaatcactttcaggcgagtcggtgtt
ccaactgccaatgacatcatcaaatcatccagcaaagacgccaccaggtttttggactct
gttccagccacagctgttgaatatttcagggaatckgcagagaagctgatcaaagagaag
ggagcggtggatgcactcgctgctgctctggctcacatttccggagccacgagtctggag
cagagatctttgctcaactctgacgctggctacaccacgatgcagctgcagtgctcccag
gagatrcataatctgggttatgcctggagaaccattaaagagcagctgggagaggacttt
gaaaaccacattcacagaatgaccttcctcaaaggcaaaacgggagtttgtttcgatgtc
ccagccaataaagtcaaagagattcaggataattggaaagacggtcgccgctggcagctg
actgtagccacagagctcccggagttagaggagaagcagttccccaaccgtggagataga
ggcgggtttagaggcgggagggggcgcggcttcggtggaaacggaggacgtaacggcggc
ttccggagcggcggaggyggaggctmcaacaaccgaggaggacacaaacggaccttcaac
catgcgtttgattactga
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