Poecilia reticulata (guppy): 103463116
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Entry
103463116 CDS
T05149
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103463116 (sox2)
Transcription factors [BR:
pret03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103463116 (sox2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103463116
NCBI-ProteinID:
XP_017159936
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Position
LG4:complement(2978576..2979940)
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AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTPGNGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGSGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPGQMQSMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQSTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSDQSAQSRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
acgggcaacaccaacaccccggggaacggcccgaaccagaaaaacagcccggagcgggtc
aagagacccatgaaygcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactccgaaatcagcaagaggctgggcgccgagtggaaactt
ctgtcggagagcgagaagagaccgttcatcgacgaagccaagcggctgagggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccctgcccggcgggctgctggcccctggaggaaacgggatggggtct
ggggtcggcgtgggagtgggggccggactgggcggtggggtgaaccagcggatggacagc
tacgcggcgcacatgaacggctggaccaacggcggctacgggatgatgcaggaccagctg
agctaccagcacccggggctgaacgcgcacaacccgggccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaactccatgacgagctcccagagctacatgaacggc
tccccgacctactccatgtcctactcccagcagagcacgccggggatgaccgcgctgggc
tccatggggccctcctcggtggtcaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccgctccgggctgccaaagcggcgacctgagggacatgatc
agcatgtacctgccgggggccgaggtgagcgaccagagcgcccagagcaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccattaaca
cacatgtaa
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