Poecilia reticulata (guppy): 103463270
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Entry
103463270 CDS
T05149
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pret03016
]
103463270 (trmt13)
Enzymes [BR:
pret01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
103463270 (trmt13)
Transfer RNA biogenesis [BR:
pret03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103463270 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
103463270
NCBI-ProteinID:
XP_017159865
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All DBs
Position
LG4:complement(5606250..5611270)
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AA seq
564 aa
AA seq
DB search
MAAPLPSRCGFFVQKKNRFCKMVPGKGRSFCGEHATMVSHVDSGVTSQKGLIWIGALINN
YVIKTVTCFLFQEEGVGGSRRITCPLDPKHTVAQQNLEKHLKKCNSREKPRPVYYVENIN
AGRVDRDQELPEVSLAERSRADLESLVEKLKAAAEGLQQDVEDRTLSHPVLQEELSDPRN
GGSAHKHLKQQASLLGHLQELGLLSRGRCFVEFGAGRGKLSHWIHRALQNPEGQGVAMET
SQDLQLLLVERCSTRFKVDGKHQGSADPFERLQVDIQHLDLSKVPVLREKALPLVGVGKH
LCGAATDLALRCLLDTAGTRPGTQPLPKRLRGPELNSGTGPVLGLAVALCCHHRCEWRHY
VGQQFFLQRGLGPAEFSAFCRMSSWATCGPPANHSGAANHSGAASHSGAANHSGAANHSG
AANQSGAANHSGAASHSGAANHSGAANHSGAANQSGAASHSGAANQSGAANQSGAASHSG
AASHSGAANQSGAAEGREEAEQLAALSRFWSAAEREHLGRLCKLLIDSGRRDFLRTRGFS
SRLIGYIDAEVTLENVLLTALPSS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacctctgcccagcagatgcggcttcttcgtccagaagaaaaaccgcttctgt
aagatggtccccggaaaggggcggagcttctgcggagagcacgcgaccatggtgagtcac
gtggattcaggagttacttcccaaaaaggtctcatctggatcggtgcgctgatcaacaat
tacgtcattaaaactgtgacgtgtttcctgtttcaggaggagggggtcggtggcagcagg
aggatcacgtgtccactggaccccaagcacactgtggcccaacagaacctggagaagcac
ctgaagaaatgcaactctagagagaaaccccgacccgtctactatgtagagaacatcaat
gcaggacgagttgacagagatcaggagcttccagaggtgtctctggctgagcgcagcaga
gcagatctggagtctctggtggagaaactgaaggcagctgctgaaggtcttcagcaggac
gtggaggacaggactctgtcccatcccgtcctccaggaagaactgtctgacccaaggaac
ggaggctccgcccacaaacacctgaagcaacaggcctccctcctaggtcacctgcaggag
ctgggtctgctcagcagggggcgctgctttgtggaattcggcgctgggcggggaaagctg
tcccactggatccaccgggccctgcagaaccctgagggtcagggcgtcgccatggaaacc
agccaggacctccagctgctgctggtggagcgctgcagcacccgcttcaaggtggacggg
aagcaccagggttctgcagacccatttgagcggctacaagtggacattcagcacctggac
ctgagtaaagttccagtgctgagggagaaagcgctgccactggtgggagtcgggaagcat
ctctgcggagcggcgacagatctggccctgcgctgcctactggacacggccggaacccga
ccaggcacccagccgcttcccaagcgcctcagagggccagagctcaactctggtactggt
ccggttctgggcctggccgtggcattatgctgccaccaccgctgtgagtggcgtcactac
gtgggtcagcagttcttcctccagagaggactcggacccgccgagttctccgccttctgc
cgcatgtccagctgggccacctgcggcccgccggccaatcacagcggagcggccaatcac
agcggagcggccagtcacagcggagcggccaatcacagcggagcggccaatcacagcgga
gcggccaatcagagcggagcggccaatcacagcggagcggccagtcacagcggagcggcc
aatcacagcggagcggccaatcacagcggagcggccaatcagagcggagcggccagtcac
agcggagcggccaatcagagcggagcggccaatcagagcggagcggccagtcacagcgga
gcggccagtcacagcggagcagccaatcagagcggagcggctgaaggtcgtgaagaagcg
gagcagctggcggcgctgagcaggttctggtcggcggcagaacgggagcatctgggtcgg
ctctgtaagctgctgatcgacagcggtaggcgggacttcctgcggaccagaggcttcagc
agtcgtctgattggctacatagacgcagaggtgaccttggagaacgttctgctgaccgcc
ctgccctcgtcctga
DBGET
integrated database retrieval system
