Poecilia reticulata (guppy): 103463279
Help
Entry
103463279 CDS
T05149
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103463279 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103463279 (smarce1)
03036 Chromosome and associated proteins [BR:
pret03036
]
103463279 (smarce1)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103463279 (smarce1)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103463279 (smarce1)
PBAF complex
103463279 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
HMG_WDHD1
Pcf11_helical
RMI1_C
AAA_33
CENPH
Motif
Other DBs
NCBI-GeneID:
103463279
NCBI-ProteinID:
XP_008404759
UniProt:
A0A3P9N7T5
LinkDB
All DBs
Position
LG1:17422115..17434632
Genome browser
AA seq
426 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPNTPGFVGYNPYSHLAYNNYRLGGSQSSNSRATNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSVKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFNNELKRLCCMKVEVDMEKISAEIAAAEEVARKRM
AEREKDGGDRVAREAPTCVLAEEEKHVCATHGKKSQPNSHSESSKEGEDAESNAADPPVK
QKASEEMEAHAGSEEGASEDKESVPEGAMEEGTSDSNTGSETTSAQTEDATTSEPSEGPG
KARAAH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagagaccatcctatgcccccccgccgcctcctgccccaacgactcaaatgccc
aacacacccgggtttgtggggtacaacccatacagtcatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcgggcaacgaattcctctggaataaacatccca
aagcccccaaaaccacctgacaagccactgatgccctacatgagatacagtcggaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggaatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataacgagagcatgaaggcctatcacaactcaccagcgtacctg
gcctatgtcaacgcaaaaagccgggccgaggccgctctggaggaggagagtcgccagagg
cagtccagactggacaagggcgagccttatatgagcatccagccagcagaggatccagac
gactacgacgacggcttttccgtgaaacacacagctgctgctcgtttccagcgcaaccac
cgcctgatcagcgagatcctgagcgagagcgtcgtcccagacgtgcggtccgtcgtcacc
accgcccgcatgcaggtgctcaaacgccaggtccagtcgctaatggtgcatcagagaaaa
ttggaggcagagttgctacagattgaagaccgccaccaggacaagaaaagaaaattcatt
gaagccacagagtcgttcaacaatgagctcaaaaggttgtgctgcatgaaggtggaagtg
gacatggagaagatctctgcggagatcgctgcagcggaagaggtggcacgtaagcggatg
gcggaacgcgagaaggacgggggggaccgagtggcgagagaggcgcccacctgcgtcttg
gcagaggaggaaaaacatgtttgtgctacacatggcaaaaagtcccagccgaactctcac
agtgaaagcagcaaggaaggagaggacgcagagtcgaatgctgcagatccaccagtgaag
caaaaagcttcagaggagatggaggcccatgcaggcagcgaggagggagcgtcagaggac
aaggagagcgtccccgagggagccatggaggagggaaccagcgacagcaacacgggctcg
gagaccacctccgcgcagacagaagacgccacgaccagcgagccatcagagggacccggc
aaggcgagggcagcccactga
DBGET
integrated database retrieval system
