Poecilia reticulata (guppy): 103463470
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Entry
103463470 CDS
T05149
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103463470 (rnf13)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103463470 (rnf13)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103463470 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
FeoB_associated
Hemotin
zf_RING_Vps8_fungal
Glucos_trans_II
zf-RING_4
DUF7027
PHDvar_NSD
PHD
RINGv
Neur_chan_memb
LapA_dom
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
103463470
NCBI-ProteinID:
XP_008405055
UniProt:
A0A3P9NKK8
LinkDB
All DBs
Position
LG4:6277829..6313675
Genome browser
AA seq
378 aa
AA seq
DB search
MLLSLGMLMLSATQVYTIFTVQLFAFLNLLPVEADIAAYSFDNKTETFDDMPARFGYRLP
SDGLKGFLIGARPENACEPIEPPPRENMTGAFIVLIKRYDCNFDMKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLDVLKQIVIPSVFVSELTANALKDDYMYDKGGHLVLIPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLRKDQLKKLPIHKFKKGDNYDVCA
ICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDSEEGDS
GPDENEVSESTPLLRSQASTSAHSFGTMSGASRSEQDSSEYDDDDELGSSDSEEEVTVET
VVVQMQQPCSDEHDLPRA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtctctgggaatgctgatgctctccgccacgcaggtttacaccatcttcacc
gtacagcttttcgccttcctcaacctgctgccagtggaggccgacatcgctgcttactca
tttgataacaaaaccgaaacctttgacgacatgcctgctcggttcggctaccgcctcccc
agcgatggacttaaaggtttcctgatcggtgcccggcctgaaaatgcgtgtgagcccatc
gaaccgccgcccagggaaaacatgacgggcgccttcatcgtcctcatcaagcgatacgac
tgcaacttcgacatgaaggtcctcaatgcacaaaaagctggatataaggcggccattgtt
cacaatgtggactctgatgacttaatcagcatgggatccaacgatttggatgttctgaag
cagatagttatcccctctgtatttgtgagtgagctcaccgccaatgctctcaaagacgac
tacatgtatgacaaaggaggacacctggtcctgatcccagacttcagcttgcctctggag
tattacctgattcccttcctcatcatagtggggatctgcctcatcctcatcgttgttttc
atgatcacaaagttcgtccaggatcgacgcagagctcggagaagtcgtctgaggaaggat
cagctgaagaaacttcccatccacaagttcaagaaaggggataactatgatgtctgtgcc
atctgcctggatgaatatgaggatggagataaactcagagtcctgccgtgctctcatgcc
taccacagcaagtgtgtggacccctggctgaccaaaaccaagaagacgtgtcctgtgtgc
aagcagaaggtggtcccctctcagggcgactcggattcggattcagaggagggggacagc
ggccccgacgagaacgaggtgtccgagagcacgcccctgctgcgctcccaggcctcgacc
agcgcccactccttcggcaccatgtcgggagcgtcgcgctcggagcaggactcctcggag
tacgacgacgacgacgagctgggcagcagcgacagcgaggaggaggttaccgtggagacc
gtcgtggtgcagatgcagcagccgtgctccgacgagcacgacttaccccgagcttga
DBGET
integrated database retrieval system
