Poecilia reticulata (guppy): 103463961
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Entry
103463961 CDS
T05149
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04136
Autophagy - other
pret04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103463961 (atg4b)
04136 Autophagy - other
103463961 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pret01002
]
103463961 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103463961 (atg4b)
03029 Mitochondrial biogenesis [BR:
pret03029
]
103463961 (atg4b)
Peptidases and inhibitors [BR:
pret01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103463961 (atg4b)
Membrane trafficking [BR:
pret04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103463961 (atg4b)
Mitochondrial biogenesis [BR:
pret03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103463961 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
103463961
NCBI-ProteinID:
XP_008405954
UniProt:
A0A3P9PII7
LinkDB
All DBs
Position
LG4:16387770..16398650
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AA seq
391 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALMCRHLGRDWRWAREQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVIIEEIK
RLCMPWLDLAGEAAGEGEVNGCLEGACALAEEETALWRPLVLLIPLRLGLSDINEAYIET
LKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDGQVPDDTYHCQ
HPPCRMHICELDPSIAAGFFCKTEDDFDDWCMRIRRLSCKKGGLPMFELVDSQPVHMVSV
DTLNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctacattgacatacgacacacttcgctttggagagtttgaagattttcct
gagacctcagagcccgtgtggatcttggggaaagaatacaatgcgcttacagagaaagac
gagattctgtccgacgtcacgtcgcggctgtggttcacgtacagaaaaaacttcccgccc
atcggaggcaccggaccaacgtcggacacgggatggggatgcatgttacggtgcggccag
atgattctcggagaggccttgatgtgcagacacttgggcagagactggagatgggccaga
gagcagaaacaaagagaagagtacatcagtattctcaacgccttcatcgacaaaaaagac
agctattattccatccatcaaatcgcccagatgggcgttggagaggggaagcccattgga
cagtggtatggacctaacacggtggcccaggttctgaagaagctggctgtgtttgatacg
tggagcagattagttgtacacgtggcgatggacaacactgtgatcatcgaggagatcaag
cgtctttgcatgccgtggctggacctagcaggtgaagcggcaggagagggggaggtgaac
ggctgcctggagggagcgtgcgccctggctgaggaggagacggccctgtggaggccgctg
gtcctgctcatccctctcaggctgggcctgagtgacatcaatgaggcctacatcgaaacg
ctcaagcaatgcttcatgctgcctcagtcgctgggtgttattggggggaaacccaacagt
gcccattacttcattggttatgtcggggaggagctcatctatttggacccacacaccacg
cagcctgccgtggagccgtgcgaagacggccaggtccccgatgacacgtaccactgtcag
cacccgccctgccgcatgcacatctgtgagctggacccatccatcgcagcgggtttcttc
tgcaaaacggaggatgattttgacgactggtgtatgcgcatacgcaggttgtcctgcaag
aaaggaggcctgcccatgtttgagttagtagacagccagcccgtccacatggtcagcgtt
gacacccttaaccttactcctgatttctcggactcggacaggctggagcggttcttcgat
tcggaggacgaggagtttgaaatcttgtccctgtaa
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