Poecilia reticulata (guppy): 103464038
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Entry
103464038 CDS
T05149
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03030
DNA replication
pret03410
Base excision repair
pret03420
Nucleotide excision repair
pret03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103464038 (rfc4)
03410 Base excision repair
103464038 (rfc4)
03420 Nucleotide excision repair
103464038 (rfc4)
03430 Mismatch repair
103464038 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pret03032
]
103464038 (rfc4)
03036 Chromosome and associated proteins [BR:
pret03036
]
103464038 (rfc4)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103464038 (rfc4)
DNA replication proteins [BR:
pret03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103464038 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
103464038 (rfc4)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103464038 (rfc4)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103464038 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
103464038 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_30
AAA_16
AAA_22
AAA_assoc_2
AAA_11
DUF815
Mg_chelatase
AAA_24
AAA_19
SLFN-g3_helicase
RuvB_N
AAA_14
Gp44_lid
AAA_5
AAA_28
Cdc6_lid
ResIII
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
103464038
NCBI-ProteinID:
XP_008406064
UniProt:
A0A3P9PAN3
LinkDB
All DBs
Position
LG4:complement(13028419..13052954)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATIQTSRPQKDKVTAGPSAEKKAKAVPWVEKYRPKCVDEVAFQDEVVAVLKKS
LKGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTHPNGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRSTRFCLICNYISR
IIEPLTSRCSKFRFKPLASQIQEERLLEICDKEKLKYTKASIAALVQLSEGDLRKAITFL
QSAARLNADKEITGQAIIEIAGVVPSKMIDNLLQICFRGTFEKLEVTVRNMVNEGYAATQ
ILSQLHDCILEKDITDEQKSAIFEKMAVVGKCLADGADEYLQMLSLCSVIMQQAGQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctgaaaggagcaactatccagaccagcagaccccagaaggataaggtg
acagcgggacccagtgctgagaagaaggcgaaggctgttccctgggtcgagaaatacaga
cccaaatgtgtagatgaggtggccttccaggatgaggtggttgcagtgctgaagaagtca
ctgaaaggagcagatcttccaaaccttctcttctacggtcctcctggaacaggaaagact
tccaccatcttagctgctgccagagaactttatgggccagaactgtatcgacagagggtg
ctggagctgaatgcttcagatgaacgaggaattcaggtcatcagggagaaagtgaagaac
ttcgctcagctcactgtggctgggacacatccaaacggaaagccatgtcctccttttaag
atcatcatcctggacgaagcagactctatgacagctccagctcaagctgctctcaggcgg
acaatggagaaggagtcccgctccacccgcttttgcctcatctgtaactacatcagcagg
attattgagcctcttacctccagatgttccaagtttcgtttcaaacctctggccagtcag
atccaagaagaacgtttgctggaaatctgtgataaggagaagctcaagtacaccaaagcg
agcattgcagcgttggtgcagctgtctgagggggatctgaggaaagccatcacctttctt
cagagcgcagcgcgtctcaacgctgacaaggaaatcactggccaagctataattgagata
gcgggggtcgttccttccaaaatgattgataatttgctccaaatctgcttcagaggaacg
tttgagaaactagaagtcacagtgaggaacatggtgaatgaaggatatgcagccacacag
atcctgagtcagctccatgactgcatcttggaaaaggacattactgacgagcaaaagtca
gccatctttgaaaagatggcggttgtaggaaagtgccttgctgatggtgccgatgaatac
ctgcagatgctgagtttgtgttcggtgatcatgcagcaggctggtcagagctaa
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integrated database retrieval system
