Poecilia reticulata (guppy): 103464113
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Entry
103464113 CDS
T05149
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103464113 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
103464113 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103464113 (lsm7)
03041 Spliceosome [BR:
pret03041
]
103464113 (lsm7)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103464113 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
103464113 (lsm7)
Spliceosome [BR:
pret03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103464113 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
103464113
NCBI-ProteinID:
XP_008406182
UniProt:
A0A3P9PSL3
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All DBs
Position
LG4:28246091..28246899
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AA seq
130 aa
AA seq
DB search
MKNGISNDKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYM
RGTWTSFKALKLDERSLNNQWTXGTSSLAQTKHYFIHFCIHDQKKVSDIQPLKKRRAPFF
SFKVLCIHVY
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgggatttccaatgacaaagaaaagaagaaaaaggagagcatcttcgacttg
tctaaatacattgacaagacaattcgtgtgaagttycaaggaggaagagaggccagcggc
gtcctgaaaggatttgatcctctgctaaacctggtgctggacggcacgatcgagtacatg
cgaggtacgtggacaagttttaaggctttaaagctcgacgagaggagcttaaataaccag
tggactkctggmacttcatctcttgctcagaccaaacattactttattcacttctgcatc
catgaccaaaaaaaagtctctgacatacagccattgaaaaaaagaagagctccctttttc
agtttcaaagttttatgcatacacgtatattag
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