Poecilia reticulata (guppy): 103464161
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Entry
103464161 CDS
T05149
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103464161
Cell adhesion molecules [BR:
pret04515
]
Cadherins
Protocadherins
103464161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103464161
NCBI-ProteinID:
XP_008406271
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Position
LG1:15112911..15136464
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AA seq
1053 aa
AA seq
DB search
MIWLILLLSILNGALCQLHYSVPEEREPGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVEDVNDNPPSF
PEPDIFVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFSLDVQTQSDGTKFAE
LVLEKPLDREQKAVHRYVLTAVDGGVPQRTGTALLEVKVLDSNDNAPTFDESVYTVNLRE
NSPVGTLVIQLNATDVDEGLNGEIIYSFSSHNTPRIKDLFNIDERTGRIEVAGEVDYEES
NTHQINVQAKDLGANAVPAHCKVLVKLVDVNDNTPEISFSTVTESVSEQHAPGTVIALFS
VSDRDSGENGQMSCEIMGDVPFKLKSSFKNYYTIVTDGSLDRENTESYTITIVATDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVTALDPDIGQNSLITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAVELFSNATVNV
IIVDQNDNAPSVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGFYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRQSRGRKQKKLSKSDIMLVQSTNVTTGVGPVGQVPVEESGVGSVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSNDADHTNPCGAIVTGYSDQQPDII
SNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
CSVNLSDQLTMTSSTASSNDRSFSTFGKDGQRSQSHHSLQNHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYETSLGPYDFGLVQYRN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaatacttctgctctccattctgaatggagctctatgtcagctgcactac
tccgtgccagaagagcgagagcctggcaccgtagttgggaatatcgcagaagatctaggc
ttggacattaccaaactttccgctcgccggttccagacggtgccaagttcgcggacacct
tatctggaggtgaacttggagaacggcgctctggttgtgaaagagaaaatagacagagaa
gaaatctgcaagcagaccattccgtgcctgctgcacttggaggtgtttttggagaatccg
ctggagctgttccgcgtggagatcgaggtggaggatgtcaacgacaatccgcccagcttt
ccggagccggacattttcgtggaaatatctgagagtgccatacccgggactcgtttcccc
gtggagaacgccttcgaccccgacgttggcaccaacgcgctcagcacgtatgctataacc
aacaataactatttttccctcgacgtgcagacgcagagcgacgggaccaaattcgcggag
ttggtgctggagaagccgctggacagagagcagaaggcggtccatcgctatgtcctgacg
gctgtggacgggggcgtcccgcagcggaccggaacggctctgttggaagttaaagttctg
gactctaatgacaacgctcccacgttcgatgagtccgtgtacacggttaacctgcgggaa
aactcacccgtggggaccctagtcatccagctaaacgccacggatgtagacgagggacta
aacggagaaatcatttattcctttagcagccacaacaccccgcggataaaagacttgttc
aacatcgacgaaagaacgggcaggatagaagtggccggcgaggtggactacgaagagagc
aacacgcaccagatcaacgtccaggcgaaagatctgggggctaacgccgtccctgcgcac
tgcaaagtgctggtcaaacttgtggacgtgaatgacaacacaccggagatcagcttcagc
accgtaactgagtctgtgagcgagcagcacgccccgggcaccgttattgccctcttcagc
gtttcggaccgagactctggtgagaacggtcagatgagctgtgagatcatgggcgacgtc
cccttcaagttgaaatcgtcgtttaaaaattactacaccatcgtaacggacggctccctt
gacagggagaacacggaatcgtacaccatcacaatcgtggccacagacaaaggtcagccc
tcgttggccaccagcaaatcaattaaggtgcacgtctccgacgagaatgacaacgcgccc
cgctttacgcaggctgtttatgacgtctatgtgactgagaacaatgtgcctggcgctttc
attcacgcagtgaccgccttggaccctgatataggacagaactctttaattacctactcc
atattggagtgtgacatccagggaatgtctgttgacacgtatgtctccataaaccaagac
accggctacctttacgcgctgcgctcttttgattatgagcagctgaaggagttcagcttc
atggtccaggctaaggactcaggtgctgtcgagttgttctccaatgccaccgttaacgtc
atcatagtcgaccaaaatgacaacgctcccagcgtcatagcccctataggtaaaaacggc
acggctaaagagcacttgccgcgttccgcggagcctggatacctggtgacgcgcatcgtg
gccatggacgcagatgacggcgaaaacgcacggctgtcctacagcatcctgcggggcaat
gagatgggaatgtttcgcatggactggaggaccggggagctgagaacggcgcgcaggatc
tcccccaagcgggacccacagggcttttacgacctgctgatagaggtgagggaccacggg
cagcctcctctctcctcttccgccagtgtgagcgtaatactagtggacagcgtggtggag
ggccgcagtggggaccgcggctcggcctccaaggctaaagagacttctcttgatctcacc
ctgattctcatcatcgccctgggctccgtgtcctttatattcctcctggccatgatagtg
ctggccgtgcgctgtcaaaaggacaagaagctcaatctgtacacgtgcctgttggccggt
gactgctgcctgtgctgtggctcctgctgcagcaggcagagccgcggcaggaagcagaag
aagctgagtaaatccgacatcatgctggttcagagcaccaacgtgaccacgggagttggg
cccgtcgggcaggtgccagtggaggagtctggggtggggagcgtgggaggcgggtttggc
tcccaccaccaccaaaaccagaactcctattgctaccaggtgtgcctgacaccggagtct
gccaagacggatctgatgttccttaagccgtgcagcccctcccgcagcaacgacgctgat
cacaccaacccctgcggggcaatagtgaccggctacagtgatcagcaaccggacattata
tctaacggcagcattctctccagtgagacaaaacatcaacgagcagaactcagctatctg
gtggacagacccaggcgtgtcaacagttctgcatttcaagaggcagacattgtcagttct
aaagacagtggtcacggcgacagtgaacagggcgacagcgaccacgacgcaacaaaccgg
ggtcactcagccggtgctgacctgttctccaactgcacagaggagtgcaaggccctgggt
cactctgaccgctgctggatgccgtcctttgtgccatcagatgggcgccaagggccggac
taccgcagcaatctgcacgtccctggcatggacgccacgctacccgacactgaggtaccc
tgctccgtcaacctatccgaccaactcacaatgacctcctccaccgcctcgtccaacgat
aggtcattctccacctttggcaaggacggccaaagatcacagtcacaccacagccttcaa
aatcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaaccaacctttctctgtgagtatcagtatgaaacctca
ctgggaccctacgattttggtctggtccagtatagaaactaa
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