Poecilia reticulata (guppy): 103464195
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Entry
103464195 CDS
T05149
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103464195 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103464195 (rad54l)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
103464195 (rad54l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
103464195
NCBI-ProteinID:
XP_008406365
UniProt:
A0A3P9Q5M1
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Position
LG4:30593613..30615697
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AA seq
739 aa
AA seq
DB search
MRRSLAPSQLAKRKPAGQACGDRGLTGNTEKRRKVDGMRESHISPYREPLTQLNKWPGSM
EADRHESFIRSILSKPFKIPIPNYTGSLGSKALGLKHTGVRKSLHDPFAEDALVLYEPPT
LSAHDLIKADKEKLPVHVVVDPVLGNVLRPHQREGVKFLWDCVTGRRIPGSYGCIMADEM
GLGKTLQCITLMWTLLRQSLNAKPEINKAIVVSPSSLVRNWYNEVGKWLGGRISPVAIDG
GSKEDIDKQLVNFMSQHGLKVATPILIISYETFRLHADVLHRGKVGLVICDEGHRLKNAD
NQTYQALHAMNAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGR
DADASNRDREEGEKKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCKLTPLQIELYK
RFLKQAKPTETLQEGRINVSSLSSITSLKKLCNHPALIYDKCVEEEEGFEGALDLFPAGY
STKALEPQLSGKMVTLDYILAVTRSTTGDKVVLVSNYTQTLDLFEKLCRFRRYLYVRLDG
TMSIKKRAKIVEKFNSPQNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA
RVWRDGQKKTCYIYRLISTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGQLRELF
TLNEETVSDTHDKFHCCRCVNGREVRLPPEGADCTSDLSQWNHCFDKKGLRDQVLKASWD
SAVSFVFHQRSHEDQKGVI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcctggcgcccagtcagctggctaagcgcaaaccagccggacaggcctgc
ggtgaccgggggctcacaggaaacaccgagaagagaaggaaagtggatgggatgagggag
agtcacatttctccctacagggagcctctgacacaacttaacaagtggcctggaagcatg
gaagctgacagacatgagtcatttatccgaagcattctctccaagccttttaaaattcct
attcccaattacacaggttcactaggcagcaaagcacttggcctaaagcatacaggagta
aggaaatcgctccatgatccatttgcagaagatgctttggttctttatgagccgccgact
ctgagcgctcatgatctgatcaaagctgacaaggaaaagcttccagttcatgttgttgtg
gatccagtattgggaaacgttctcagaccccatcagagagagggagtgaagttcctttgg
gactgtgtgactggcagacgcatccctggatcctacggctgcatcatggctgatgagatg
ggcctgggaaagactttgcagtgtatcactctcatgtggaccttgctacgccagagcctt
aatgccaagccagagataaacaaggcaattgtggtttcaccatctagtctggttcggaac
tggtataatgaagtaggaaagtggcttggaggtcgtatttcaccagtggcaatcgatggg
ggctcaaaggaggatattgataagcaactagtgaacttcatgtcccaacatggtttgaaa
gtagcaacacccatcctgataatttcttatgagacatttcgacttcatgctgacgtccta
cacaggggcaaagttggacttgtgatctgtgatgaggggcatcgactgaagaatgctgac
aaccagacttaccaggctctgcatgctatgaacgcccagcggagagtgctgatatcaggc
actccaatccagaatgacctgctggagtatttcagtctggtccattttgtaaatgctgga
atccttggtactgcccaggagtttaagaagcgattcgagcttcccattctgaagggtcgg
gatgcagacgccagtaacagagatagagaggaaggagaaaaaaaactcaaggaactcatc
agcatcgtcaacaggtgtttgattaggagaacatcggatatcctgtcaaagtatcttcct
gtgaaaattgagcaagttgtgtgctgcaaactaactcctttgcagatagaactgtacaag
cgctttctgaagcaggccaaacccacagagacattgcaggaaggcagaatcaatgtctcc
tcactgtcttctatcacatctctcaagaagctgtgtaaccatccagctctcatttatgac
aagtgtgttgaagaagaggagggctttgagggcgctctcgatctgtttcctgctggttac
tccactaaagcacttgaacctcagctgtctggtaaaatggtgactctcgactacattttg
gctgtgacgagatccacaactggtgacaaagtggtgctggtttccaactatactcaaaca
ctggacctctttgaaaagttgtgcagatttagaaggtacctctatgttagactggatggc
acaatgtctatcaagaaaagggctaagatcgtggaaaaattcaacagtccacaaaaccct
gaatttattttcatgctgagcagcaaggcgggtggatgtggcctcaatctgattggtgcc
aatcgcttggtaatgtttgatccagactggaatccagccaatgatgagcaggcaatggcc
cgtgtgtggagagatggccagaagaagacctgttacatctacagactgatctctactgga
accattgaggagaagatcctgcagagacaagcccataaaaaagccctgagcagctgtgtg
gtggatgaggagcaggatgtggagcgtcacttttctctaggccaacttagagaactcttc
acactcaatgaagaaactgtcagtgacacacatgacaagtttcactgctgtcgctgtgta
aatggcagagaggtccgactgcctccagaaggtgctgactgtaccagtgacctttcccag
tggaaccactgctttgacaagaagggactgagggaccaagtgctgaaagcctcctgggac
agtgctgtctcctttgtctttcatcaacgctctcatgaggatcagaagggtgttatatga
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