Poecilia reticulata (guppy): 103464239
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Entry
103464239 CDS
T05149
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103464239 (rbm39)
Spliceosome [BR:
pret03041
]
Common components
Common spliceosomal components
General mRNP proteins
103464239 (rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
103464239
NCBI-ProteinID:
XP_008406437
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Position
LG5:complement(288222..296141)
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AA seq
502 aa
AA seq
DB search
MMADDLDIEAMLEAPYRKEDGKNQSPEGQEERSKRKKRSRSKDRKRSRSRDKKRSRSRER
KGSRSRDRRRSRSRERRRSRSRERGGRYKDHHKHRRRSRSKSPIRKEKSPPRLPLDNLTP
EERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSV
PLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGSFGPMRLYVGSLHFNITEEM
LRGIFEPFGRIENIQLMMDSETGRSKGFGFITFADAECAKKALEQLNGFELAGRPMKVGH
VTERTDAAAASSFLDNDELDRSGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAI
AIGALAAVSAAMNPPLTMNMSTPALNLPSQPLATHCFQLSNMFNPNSENVPGWELDIQHD
VIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPSAMAAVNALHGRYFGGKMITAAYVPLP
TYHNLFPESATATQLLVPPARR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggatgacctggacattgaggcgatgctggaggctccatacaggaaggaggac
gggaagaaccagagccctgaaggacaggaggagcgcagcaagaggaagaagcgcagccgc
agcaaagacaggaagcgcagccgcagtcgggacaagaagaggagccgcagccgcgagcgc
aaaggcagccgcagccgcgaccgacgcaggagccgcagccgggagcgcagacgcagccgc
agccgcgagcgggggggccgctacaaagaccaccacaagcaccgcagacggtcgagaagc
aagagtccaatcaggaaggagaaaagcccacccaggctgccgctggacaacctgaccccg
gaggagcgggacgcccgcaccgtgttctgcatgcagctggcggcccggatacgaccccgc
gacctggaggagttcttctctgctgtggggaaggttcgggatgtgaggatgatctctgac
aggaactcacggaggtcaaagggcatcgcctacattgagtttgtggaggccagctcggtt
cctctggccatcggcctgacgggtcagaggctgctgggggttcccatcatcgtccaggcc
tcacaggcggagaagaaccgagctgctgccgctgctgcagccaacagcctccagaaggga
tcgtttggcccgatgcggctctacgtcggctcgctgcacttcaacatcactgaggagatg
ctgagagggatctttgagccttttggacggattgaaaacatccagctgatgatggacagc
gagacgggccgatctaaaggcttcggcttcatcacgtttgcagacgcggagtgcgctaag
aaggcgctggagcagctgaacggcttcgagctggcgggccgacccatgaaggtgggtcat
gtgaccgagcggactgacgccgccgccgcttcctccttcctggacaacgacgagctggac
cggtccggcgtggacctgggaaccacggggcggctgcagctgatggcccgcctggctgaa
ggtaccggcctgcagatccctcctgctgctcagcaggcgctgcagatgagcggcgccatc
gccatcggcgcgctggcggccgtgtcggctgccatgaatccacctctgaccatgaacatg
agcactccagcgctgaacctgccgtctcagccactcgccactcactgcttccagctgtcc
aacatgttcaacccaaacagtgagaacgtgccgggctgggagctggacatccagcacgac
gtcatcgaggagtgcaacaaacacggaggcgtcgtccacatctacgtcgataagaattca
gccgagggaaacgtttatgtgaagtgcccgtccatcccgtctgccatggccgccgttaac
gctctgcacggcaggtactttggaggtaaaatgatcacagcggcgtacgtccccctgccc
acctaccacaacctgttcccagagtctgccactgccacgcagctgctggttccaccggcc
aggcggtga
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