Poecilia reticulata (guppy): 103464394
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Entry
103464394 CDS
T05149
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret00260
Glycine, serine and threonine metabolism
pret00630
Glyoxylate and dicarboxylate metabolism
pret00670
One carbon pool by folate
pret01100
Metabolic pathways
pret01200
Carbon metabolism
pret01230
Biosynthesis of amino acids
pret01240
Biosynthesis of cofactors
pret04981
Folate transport and metabolism
Module
pret_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103464394 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103464394 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103464394 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103464394 (shmt2)
Enzymes [BR:
pret01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103464394 (shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
103464394
NCBI-ProteinID:
XP_008406674
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Position
LG5:8568978..8595807
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AA seq
501 aa
AA seq
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MLSFAFKQLTRPLCQRPSIRLGVRFQQSHAATRTVDEDGSWTGQESLAEDDPEMWALLRK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPEKWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNPATGLIDYEQMEMTAKLFRPRLIIAGTSAYARLIDYARIKKLCT
GINAYLLADMAHISGLVAAKAVSSPFEHADLVTSTTHKSLRGSRAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFAVFPSLQGGPHNHAIAGVAVALKQAQSPMFREYIAQVLKNAKAMAA
ALLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEDDFVQVVEFMDEGFKIALDVKKKTAKLQDFKNFLLQDPETVARIA
DLRHRVEAFARPFPMPGFCDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattcgctttcaagcagcttacacggcccttgtgccagcggccctccattcgt
ctcggtgtacggttccagcagtcccatgcagccacccgaacggtggatgaagatggatcc
tggaccggacaggagagtctggctgaggacgacccagaaatgtgggctctgttgcggaag
gagaaggacagacagtgccgtggtttggagctcattgcgtctgagaatttctgcagccga
gcagctctggaagctcagggctcatgtctgaacaacaaatattctgaaggctacccaggg
agaagatactacggtggagcagaagtggttgaccaaattgagcttctgtgtcagaagcga
gctttggaggcctttgacctggacccagagaagtggggcgtcaacgtccaaccatactcg
ggttctcctgctaactttgctgcctacacagctgtactcaacccgcatgaccgcatcatg
ggcctggacctgcctgatggtggacatctgacccatggctacatgtcagatgtgaagagg
atctctgcaacatcaatctactttgagtccatgccttacaagctaaaccctgcaacggga
ctcatagactatgagcagatggagatgacagccaagctgttccggcccaggctcatcatc
gctggcaccagcgcctacgctcgcctcattgactatgcccgcatcaagaagctatgcaca
ggtattaatgcctacttgcttgcggacatggctcatattagtggcctggtagctgcaaag
gcagtctcttcaccgtttgaacatgctgacctcgtcacttccaccacacacaagtccctc
agaggctccagggctggccttatcttttaccgtaagggtgtccgctcggtggacaagaaa
ggaaaagaaatcatgtacgacctggaagacaaagtcaactttgcagtgtttccctccctg
cagggtggacctcacaaccacgccattgctggagtagcagtggctcttaaacaggctcag
tctcctatgttcagggagtatatagcccaggtactaaagaatgcaaaggctatggccgca
gctcttctcagcaaaggctacactctggtatcaggtggaactgacaaccacctggttctg
gtggacctgcggccaaaaggcattgacggcgctcgagctgaaagagtgctggagctcgtg
tcgatcacggccaataagaacacgtgtcctggagacaagagcgccttgacccctggaggc
ctcaggctgggcgctccagctctgacttccagacagttcaaagaagatgactttgtgcag
gttgtcgagtttatggatgagggatttaagattgctttggatgtcaagaaaaagacagca
aagctccaggacttcaagaacttcctcctccaggacccagagacggtggcgcgcattgca
gatctgcgacaccgggtggaggcttttgccaggccgttccccatgcctggcttctgcgac
cattag
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