Poecilia reticulata (guppy): 103464575
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Entry
103464575 CDS
T05149
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103464575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pret02000
]
103464575
Transporters [BR:
pret02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103464575
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103464575
NCBI-ProteinID:
XP_008406988
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Position
5:14867554..14882320
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AA seq
590 aa
AA seq
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MDNAHSSEVKFRLDEDPDHPTTQRGQWSSKIEFLLAVAGQIIGLGNVWRFPYLCYKNGGG
VFFIPYVLFLFSCGIPLFLLETSLGQYTKQGCITCWRKICPLFEGMGYGSQVVVLYSSIY
YIVILAWAFLYLFSSFSSELPWATCRNSWNTENCVEFDPRSDYFNLTIPENATSPVREFW
ERRVLNITGSINELGSIRWELALCLLLSWIICYFCVWKGVKSTGKVVYFTATFPYVMLAV
LLVRGVTLPGAMDGIKFYLYPDASRLADPQVWMDAGTQIFYSYAICIGCLVALGSYNKYN
NNCYKDCVYLCLLNSGTSFVAGFAIFSALGFMAYEQNTDISKVAESGPGLAFIAYPRAVA
MMPFPQLWSIFFFVMIILLGLDSEFVGLEALTTSISDLYPAFFLVGHRRKLLLLFVCVFS
FFIGLVMVTEGGLYIFQVFDYYACSGMTLLLFAILQSVCVGWVYGAEHFYDNIEDMIGYR
PFPFIKYCLKYVTPVICLGTFVFSLVKYTPLKFDNTIEYPWWGYALGWWFTLSSTLMVPL
WMLYNLLITPGTLRERFSILCTPAEDLPLTKSEKKALELLTLPPSESSMD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggataacgcccacagttcagaggtcaagttcagactggacgaggaccctgatcatccc
acgacccagagaggacagtggtcaagcaaaattgagtttcttttagctgtggcggggcaa
attatagggctgggaaatgtgtggaggtttccttacctgtgctacaaaaatggaggaggt
gtgttcttcatcccgtacgtacttttcctcttctcctgcggcattcccttgtttttgctg
gagacgtccctcggccagtacaccaagcagggatgcatcacctgttggaggaaaatttgt
ccactatttgaagggatgggctatggcagtcaggtggttgttttatactccagtatctac
tacatagtgatactagcctgggcattcctgtatctcttctcttccttcagctctgaactt
ccttgggcgacctgcaggaacagctggaacacagaaaattgtgtggagtttgatccaaga
tcagattatttcaacctgacgatacctgagaacgcaacctcaccagtgagagagttttgg
gagaggcgagttttaaatatcacaggcagcatcaatgagttgggcagtattagatgggag
ttggctctctgtctgctgttatcttggatcatctgttacttctgtgtgtggaaaggagtg
aagtctaccgggaaggtcgtctacttcaccgctacgtttccttacgtgatgctcgctgtg
ctgctcgttcgtggcgtcacgctgccaggagccatggacgggatcaagttctacctttac
ccagatgcgtcccgccttgccgacccgcaggtatggatggatgccgggacacaaatattt
tattcctatgcaatttgtattggctgtctagttgcattgggcagctataacaagtacaac
aataactgctacaaggattgtgtatatttgtgccttctgaatagtgggaccagtttcgtt
gctggttttgccatcttctctgctcttggattcatggcctatgagcagaacactgacata
tcgaaagtggcagaatcaggacctggtttggcatttattgcctaccctcgggcagtcgcc
atgatgccttttcctcaactttggtccatattctttttcgttatgatcattcttctggga
ctggacagtgagtttgtaggtctggaagctctcacaacgtcaatatcggacctgtatcct
gccttcttcctcgttggccatcgacgtaaacttctgctcctgttcgtctgcgtcttcagc
tttttcattggtcttgtcatggtgacagaaggaggactgtacatcttccaggtgtttgac
tactacgcctgcagtggaatgactttgctgctgtttgccattctgcagtctgtgtgtgtt
ggatgggtgtacggtgctgagcacttttacgacaacattgaggacatgatcggataccgg
ccctttcccttcattaagtactgtctgaaatacgtcactccagtgatttgcctggggact
tttgttttttccttggttaaatacacccctctgaagttcgacaacacgatagagtatccg
tggtggggttacgctctgggctggtggttcactctctcctcaaccctcatggttcccctc
tggatgctgtacaatctgctcatcactcctggtaccctgcgggagagattctctatcttg
tgcactccagctgaagaccttcctctgaccaaatcagaaaaaaaagctctcgaacttctc
accttgcccccgtcggagagcagcatggactga
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