Poecilia reticulata (guppy): 103464659
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Entry
103464659 CDS
T05149
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103464659 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103464659 (smarcd1)
03036 Chromosome and associated proteins [BR:
pret03036
]
103464659 (smarcd1)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103464659 (smarcd1)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103464659 (smarcd1)
PBAF complex
103464659 (smarcd1)
GBAF(ncBAF) complex
103464659 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103464659
NCBI-ProteinID:
XP_008407123
UniProt:
A0A3P9P298
LinkDB
All DBs
Position
LG5:10315355..10329260
Genome browser
AA seq
515 aa
AA seq
DB search
MAARGGFQSTPTAGGGGAMGPGPPVPGAAPGMGPGTPSGRMGPTSGAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDFKTITDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcaacaccgactgctggtggcggtggagcaatggga
cctgggccaccggtaccaggcgcagcgccaggtatgggacctgggactccctctggaaga
atgggaccgacttcaggcgcacagaaccacatgtaccgctctccgatgcccgggcctggg
tacccgaggccgggcatgcccccatccagccgtatgaccccgcagggccccgccatgggc
ccaccgggttacggcagcagccccgtgtctcgccccgggatgcccggcgtgatggacccg
tcccggaaaagacccgctcctcagcagattcagcaggttcagcagcagcagaaccgcaac
cagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagagagctg
gtcccagagtctcaggcttacatggatcttctggcttttgagaggaagctggatcagacc
atcatgcgcaaacggctcgacattcaggaggccctaaaaaggcctataaagcaaaagaga
aagcttcgcatttttatatccaacaccttcaatcctgcgaagcctgatgctgaggatgga
gaaggcacagttgcatcatgggagctgcgtgttgaagggcgactattagaagatactgct
gtgtccaagtatgaagctaccaaacaaaagagaaagttctcctccttctttaagtcgctt
gtgatcgaattggataaagacctgtatgggccagataatcaccttgtggaatggcacagg
acggccactacccaggagacggacggtttccaggtgaagaggcccggtgatgtgggagtt
cgctgcaccgtcctgctcatgctggattaccagcccccccagttcaagctggacccccga
ctggcccgcatgttgggcatccacactcagaccagacctgtcatcatccaggctttgtgg
cagtacgtcaaaacacacaaactccaagatccgcatgagcgcgagttcatcaactgtgac
aaatacctccagcaaatttttgaaactcagcgaatgaagttttccgaaatccctcagcgc
ctgcatgctctgctgatgcctccagaaccaatcatcatcaaccatgtgatcagtgtggat
cccaatgatcaaaagaagactgcctgctatgacattgacgtggaggtggacgacacgctg
aagacccagatgaactcattcctgctctccacagccagtcagcaggaaatagcaggattg
gataacaagatccatgaaactattgagaccatcaaccagctgaaaacccagagggagttc
atgttgagctttgccagggatcctcagggctttatcaacgactggcttcagtcccagtgc
agggacttcaagaccattacagatgttgtgggaaacccagaagaggagcggagagcagag
ttttactatcagccgtgggctcaggaggcggtgtgtcgctacttctactccaaggtccag
cagaggcggcaggagctggaacaggcgcttggaatcaggaacacttga
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