Poecilia reticulata (guppy): 103464918
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Entry
103464918 CDS
T05149
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103464918
03015 mRNA surveillance pathway
103464918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103464918
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103464918
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103464918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
103464918
NCBI-ProteinID:
XP_008407546
UniProt:
A0A3P9N114
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All DBs
Position
LG5:complement(20339644..20348261)
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AA seq
488 aa
AA seq
DB search
MASESWAQAVDEQEAAAESISSLQIKEKPEENGTVSNATDSSSGAAKSEGEGDAKPADDD
DKEDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKYYPEVKLVYAIRGNKLERGSKLQEQIVIGTPGTMLDWCNKFRFI
DPKKIRVFVLDEADVMIATQGHQDQSIRIQRTLPKNCQMLLFSATFEESVWSFAQRIVPE
PNIIKLKREEETLDTIKQYFVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIERLDTDDL
DEIEKIAN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagtcttgggcgcaggccgtggatgagcaggaagccgcggcagaatcgatt
agtagtcttcagataaaggagaaaccagaagaaaatggtaccgtttcaaatgccacagac
tccagcagtggggctgcaaaatcagaaggcgaaggtgacgccaaacctgcagacgacgac
gacaaggaggacaaagcggcacaatcgctgttgaacaagctgatacggaataacctcgta
aatacgacaaatcaagtggaagttctccagaaggatccaaactccccgctatactctgtg
aagtcctttgaagaactacgcctcaaaccacagcttcttcagggtgtatatgccatgggg
ttcaatcgaccatctaaaatccaagagaccgccttacccatgatgctggcagagcctcca
cagaacctgattgctcagtctcagtcagggacaggaaaaacggccgcctttgtcctggca
atgctcagccacgtcgaccccaacaacaaatatccccagtgcttgtgcgtgtcgccgacg
tacgaactggcacttcagaccggcaaagttatcgagcagatgggcaaatattatcccgaa
gtcaaactagtctacgccattagagggaacaagttggagcgaggcagcaaactgcaggaa
cagatagttattgggacacctggtacgatgctggactggtgcaataaattccggtttata
gatcccaagaagatcagagtgtttgtgttggacgaagctgacgttatgatcgccacgcag
ggacaccaggaccagagcatccgaatccagaggacgctgccgaagaactgccagatgttg
ctgttctcagccacgtttgaagagagcgtttggagcttcgcgcagcgcatcgtgcccgaa
cccaacatcatcaagctgaagagagaggaggagactctggacaccatcaagcagtacttt
gtgctctgcaacagcagagaggagaagttccaagctctctgtaacatctacggagccatt
accatcgctcaggccatgatcttctgccatacgaggaaaactgcaggttggcttgcaggg
gagctgtccagagaaggccaccaggtggcgctgctcagtggagaaatgcaagtagagcag
agagctgccgtcatagaccgcttccgagatggaaaggagaaagtcctggtgaccacaaat
gtctgtgctcgaggcatcgacgtggagcaggtttctgtggtgatcaatttcgacttgcca
gtcgacaaagatggtaaccctgacaacgagacgtacctgcacaggattgggcgtaccggc
cgatttgggaagaggggactggccatcaacatggtggacagcaagatgagcatgaacatc
cttaacaggatccaggagcatttcaataagaaaattgaaagactagatacagatgatctg
gatgaaattgagaaaattgccaactaa
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