Poecilia reticulata (guppy): 103464978
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Entry
103464978 CDS
T05149
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103464978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103464978
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103464978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Motif
Other DBs
NCBI-GeneID:
103464978
NCBI-ProteinID:
XP_017160448
LinkDB
All DBs
Position
LG5:complement(18738558..18774344)
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AA seq
299 aa
AA seq
DB search
MVMRDPVTKRSRGFGFVTYADQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTK
KIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI
HFHEINNKMVECKKAQPKEVMTPTGSARGRSRVMPYGMDTFMLGIGMLGYPGFQTTTYTS
RSYSGIAPGYTYQFPEFHLERTPLLTSSHPPELAAIPLTAYGPMAAAAAAAVVRGSTPSR
TAGFLGTSSPGPMADLYAAANQDSGVSSYISAASPAPSTGFSHGLGGPLIATAFTNGYH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgcgggatcccgttaccaagcggtcgagggggttcggcttcgttacatacgca
gatcaggccggtgtggaaaaggttttggcacaaaacagacatgaattggattccaaaacg
atcgacccaaaggtggcgtttccccgccgggctcagcctaagcttgtgaccaggacaaag
aagatctttgtcggaggactttcagtcaatacgaccatcgaagacgtgaagcaatacttt
gatcagtttggaaaggtcgacgacgctatgctcatgttcgacaaaacgaccaacagacac
agaggtttcggttttgtcacttttgaaaatgaagacgtggttgagaaagtttgtgagatc
catttccacgagatcaacaacaaaatggtggagtgtaagaaagcccagcccaaagaagta
atgacgccgacgggctccgccaggggccgctccagagtgatgccttatgggatggacacc
ttcatgctgggcatcggcatgttaggctaccctggttttcagactactacctacaccagc
cgcagctactctggaatagcacccggatacacttaccagttcccagagttccacttagag
cggaccccccttctgacatcatcccacccccctgagctggcagccattcccctcactgca
tacggaccaatggcggcggcggcggcagcagcagtagtcagaggctccaccccttcacgc
acagctggtttcctgggcaccagcagccccggaccaatggccgacctgtacgctgcggcc
aaccaagactcaggagtcagcagctacatcagtgccgctagccccgcccccagcacaggg
tttagccatggtctagggggtcctctgatcgccactgcgttcactaatggctaccactga
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