Poecilia reticulata (guppy): 103465055
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Entry
103465055 CDS
T05149
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X2
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103465055 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103465055 (taf5)
03036 Chromosome and associated proteins [BR:
pret03036
]
103465055 (taf5)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103465055 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
103465055 (taf5)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103465055 (taf5)
STAGA complex
103465055 (taf5)
TFTC complex
103465055 (taf5)
SAGA complex
103465055 (taf5)
SLIK complex
103465055 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_IP5PC_F
VPS8_N
PROPPIN
CDK5RAP3
LisH
Beta-prop_WDR11_2nd
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
103465055
NCBI-ProteinID:
XP_008407811
UniProt:
A0A3P9MTS7
LinkDB
All DBs
Position
LG1:12925086..12931245
Genome browser
AA seq
745 aa
AA seq
DB search
MAAVQGSIVDAKDEADIKTEPATDGFGNNHANDAGVLSASPSSTAPAGNNKPAAGAPEDQ
QTLLAVLQFLRKNKLSESAEILRREAGLPEEALDPKGADSAGSGLGSGADIDGGDASALL
SRVTVSAPGGAKAPTKAGEDQPDVNVVLSAYSQQGDPALYEVYYSGLKKFIESVLDCHRA
ELSQVFYPLFVHMYLELVYNNHEGEAKAFFEKFSGDQECYYEEDLRILSSLTKKEHMRGN
ETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDA
MSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSTGSKS
KKQDPNAPSQTRIPLPELKDSDKLDKIMYMKESTKRIRLGPDNLPSICFYTFLNAYQGLT
AVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTASDLNLIDKESDDVLERIMDDKTAS
ESKCLYGHSGPVYGISFSADRNYLLSCSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQFS
PYGYYFISGGHDRVARLWATDHHQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTIRLW
DVLTGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTECI
YSLRFSRDGEILGSGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELLLGTYL
TKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtagtatagtcgacgcraaagacgaagccgacattaaaacagaa
ccagcgaccgatggcttcggaaataatcacgccaacgatgcgggagtgctctctgcgtcc
cccagctccaccgctccggctggaaacaacaagccggcggcgggagcccccgaggaccag
cagaccctgctggctgtgctgcagttcctcagaaagaacaaactgtcagagtccgctgaa
attctgcgtcgcgaggcgggattgccrgaggaggctctggatccaaagggggctgactcc
gccggttctgggctgggaagtggtgcggacatagacggtggggatgcgagcgctttgctc
agccgggtgaccgtctctgctcccggcggagctaaggcgccaactaaagctggggaggat
cagccagacgtcaacgtggttctgtcagcctacagccaacagggagacccagctctctat
gaagtttactacagcggtctgaagaagttcatcgagtcggttctggactgccacagagca
gaactgtctcaggtcttctaccctctgtttgtccacatgtacctggaactggtctacaac
aatcatgaaggcgaggctaaggccttctttgaaaagttcagcggggaccaggagtgctac
tacgaagaggacctacgcattttgtcaagccttacgaagaaggagcacatgagagggaac
gagacgctgctggatttccgcaccagcaagttygttttgcgcatctcccgcgactcctac
cagctgctgaagaggcacctgcaggagcgccagaacaaccagatatggaatatcatccaa
gagcacctctacatcgacatcttcgatggcatgccgcgcagcaagagccagatcgacgcc
atgtccggcagcttggctggagaggccaaacgagaagcaaataaggccaaggtttactat
ggcctgctgaaggagccagaaatcgagcttccccttgatgatgaggatgaggaagcagag
aacgaggaaggtaaacccaagaagaaaaagcccaaaaaggacagcaccggctccaaaagc
aagaagcaggatccaaacgctccttcacagaccagaatacctctaccagaactaaaagac
tcagacaagctggacaagatcatgtacatgaaggagtccaccaagagaattcgtttggga
cctgacaacctgccttccatctgcttctacacctttctcaacgcataccagggtctaact
gcggttgacgttacggacgactccagtctgatcgcagggggcttcgctgactccacggtg
cgggtgtggagcgtcacgccaaagaagctccgcaaggtcaagacygcctcagatttgaat
ctgattgacaaagagtcagatgatgttcttgagaggattatggacgataagacggccagt
gagtcaaagtgcctctatggacacagcggaccggtgtatggcatcagcttcagcgcagac
agaaactacctgctgtcatgctctgaagacggcacggtcaggttgtggagcctcctgacc
ttcacctgtctggtgggatacaaaggccacaactacccagtgtgggacacgcagttttcc
ccttacggatattatttcatctccggggggcatgaccgggtcgcccgcttgtgggcgacc
gatcaycaycagccgctgcggatattcgccggtcacctggccgacgtcacttgcactcgc
ttccaccccaacgcaaattacgtggccacaggctcgtctgaccgcaccatccgtctgtgg
gacgtcctcaccgggaactgcgtccgtattttcaccggtcacaagggtcccatccacgcg
ttggcgttctctcctaatgggaagtttttggcctcgggagccactgatggcagagtcctc
ctgtgggacatcggtcatggactgatgatcggagagctcaagggtcacacagagtgcatc
tactccctcagattcagcagggatggagagatcctcggctccggttctatggacaacacg
gttcgcctgtgggatgcgacaaaagcatttgacgatttagaaackgatgacttcactgcg
gctacgggacayatccacctacaggataactcccaggagcttctgctggggacctacctg
accaaatcgacrcctgtagttcaccttcacttcacacggaggaacctgctgctggccgca
ggagcttataatccataa
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integrated database retrieval system
