KEGG   Poecilia reticulata (guppy): 103465055
Entry
103465055         CDS       T05149                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103465055 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pret03021]
    103465055 (taf5)
   03036 Chromosome and associated proteins [BR:pret03036]
    103465055 (taf5)
Transcription machinery [BR:pret03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103465055 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     103465055 (taf5)
Chromosome and associated proteins [BR:pret03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103465055 (taf5)
    STAGA complex
     103465055 (taf5)
    TFTC complex
     103465055 (taf5)
    SAGA complex
     103465055 (taf5)
    SLIK complex
     103465055 (taf5)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 TFIID_NTD2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 DSE1_N Beta-prop_SCAP PAC11 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_Aladin CFAP251_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_RFWD3 ASA1 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_NOL10_N WD_LRWD1 LisH_PAC1 Beta-prop_Nup120_160 PEP5_VPS11_N Tricorn_2nd Beta-prop_IP5PC_F PROPPIN CDK5RAP3 Beta-prop_WDR11_2nd LisH Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 103465055
NCBI-ProteinID: XP_008407821
LinkDB
Position
1:13070690..13076920
AA seq 746 aa
MAAVQGSIVDAKDEADIKTEPATDGFGNNHANDAGVLSASPSSTAPAGNNKPAAGAPEDQ
QTLLAVLQFLRKNKLSESAEILRREAGLPEEALDPKGADSAGSGLGSGADIDGGDASALL
SRVTVSAPGGAKAPTKAAGEDQPDVNVVLSAYSQQGDPALYEVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHEGEAKAFFEKFSGDQECYYEEDLRILSSLTKKEHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQID
AMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSTGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKESTKRIRLGPDNLPSICFYTFLNAYQGL
TAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTASDLNLIDKESDDVLERIMDDKTA
SESKCLYGHSGPVYGISFSADRNYLLSCSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQF
SPYGYYFISGGHDRVARLWATDHHQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTIRL
WDVLTGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTEC
IYSLRFSRDGEILSSGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELLLGTY
LTKSTPVVHLHFTRRNLLLAAGAYNP
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcggccgtacagggtagtatagtcgacgcgaaagacgaagccgacattaaaacagaa
ccagcgaccgatggcttcggaaataatcacgccaacgatgcgggagtgctctctgcgtcc
cccagctccaccgctccggctggaaacaacaagccggcggcgggagcccccgaggaccag
cagaccctgctggctgtgctgcagttcctcagaaagaacaaactgtcagagtccgctgaa
attctgcgtcgcgaggcgggattgccggaggaggctctggatccaaagggggctgactcc
gccggttctgggctgggaagtggtgcggacatagacggtggggatgcgagcgctttgctc
agccgggtgaccgtctctgctcccggcggagctaaggcgccaactaaagcagctggggag
gatcagccagacgtcaacgtggttctgtcagcctacagccaacagggagacccagctctc
tatgaagtttactacagcggtctgaagaagttcatcgagtcggttctggactgccacaga
gcagaactgtctcaggtcttctaccctctgtttgtccacatgtacctggaactggtctac
aacaatcatgaaggcgaggctaaggccttctttgaaaagttcagcggggaccaggagtgc
tactacgaagaggacctacgcattttgtcaagccttacgaagaaggagcacatgagaggg
aacgagacgctgctggatttccgcaccagcaagttcgttttgcgcatctcccgcgactcc
taccagctgctgaagaggcacctgcaggagcgccagaacaaccagatatggaatatcatc
caagagcacctctacatcgacatcttcgatggcatgccgcgcagcaagagccagatcgac
gccatgtccggcagcttggctggagaggccaaacgagaagcaaataaggccaaggtttac
tatggcctgctgaaggagccagaaatcgagcttccccttgatgatgaggatgaggaagca
gagaacgaggaaggtaaacccaagaagaaaaagcccaaaaaggacagcaccggctccaaa
agcaagaagcaggatccaaacgctccttcacagaccagaatacctctaccagaactaaaa
gactcagacaagctggacaagatcatgtacatgaaggagtccaccaagagaattcgtttg
ggacctgacaacctgccctccatctgcttctacacctttctcaacgcataccagggtcta
actgcggttgacgttacggacgactccagtctgatcgcagggggcttcgctgactccacg
gtgcgggtgtggagcgtcacgccaaagaagctccgcaaggtcaagaccgcctcagatttg
aatctgattgacaaagagtcagatgatgttcttgagaggattatggacgataagacggcc
agtgagtcaaagtgcctctatggacacagcggaccggtgtatggcatcagcttcagcgca
gacagaaactacctgctgtcatgctctgaagacggcacggtcaggttgtggagcctcctg
accttcacctgtctggtgggatacaaaggccacaactacccagtgtgggacacgcagttt
tccccttacggatattatttcatctccggggggcatgaccgggtcgcccgcttgtgggcg
accgatcaccatcagccgctgcggatattcgccggtcacctggccgacgtcacttgcact
cgcttccaccccaacgcaaattacgtggccacaggctcgtctgaccgcaccatccgtctg
tgggacgtcctcaccgggaactgcgtccgtattttcaccggtcacaagggtcccatccac
gcgttggcgttctctcctaatgggaagtttttggcctcgggagccactgatggcagagtc
ctcctgtgggacatcggtcatggactgatgatcggagagctcaagggtcacacagagtgc
atctactccctcagattcagcagggatggagagatcctcagctccggttctatggacaac
acggttcgcctgtgggatgcgacaaaagcatttgacgatttagaaactgatgacttcact
gcggctacgggacacatccacctacaggataactcccaggagcttctgctggggacctac
ctgaccaaatcgacacctgtagttcaccttcacttcacacggaggaacctgctgctggcc
gcaggagcttataatccataa

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