Poecilia reticulata (guppy): 103465347
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Entry
103465347 CDS
T05149
Name
(RefSeq) probable E3 ubiquitin-protein ligase bre1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103465347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103465347
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103465347
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103465347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
KH_DTX3L
zf-RING_4
TRAF3_RING
zf-RING_10
Siva
Baculo_IE-1
FYVE_2
RING_XB3-XBAT31
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
103465347
NCBI-ProteinID:
XP_008408301
LinkDB
All DBs
Position
LG5:complement(25850625..25855576)
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AA seq
643 aa
AA seq
DB search
MASNQEEPMDYDDQGQSANQAQAPMDPPTDQEKVLLTVSLKWLDKTKKKADLQKSLQTWF
NKFKTKIDCTVKVVLPDGRAVIVVSPPPGLTEIQKLSGKNLHTKDKKEFVTILSVMVGEP
KQDPQTANDASVTPTPPAVSVNTKDADSEPPADKAHVDGQKKPVSTPGDPPAENQTMDES
CVLSVNQFLYVSHIFKEKLQRIQDENEVEIRPEVTVKFESKRKDGKPNEAKTKFTDVVQE
CLADFNGSVFSLSSAEPDQLNRALKVIMNKENKLLANISSEEMTVFGPSGQRMVLDSMLK
TSHKTSSGYEEYDRQSSTPNFNSDLLVKINMTIKDDLADKGLTIDKDQWKSLKSSYDNHL
TVIKDKFNVDFKESSIRDGKVNVQPSYKGHGGNPAMESHAVRALLRLYQKIRVSSRPIPP
PYRATRLSGSEEASNGAGVNDNSTQNNKKSAAEGATGDNKDDTCSICLSDFTNKKQLNCK
HAFCEECLKNALKHSGPICPICKDVFGEMKGNQPDGTMSWSTNPYPLPGFPKCGHICITY
HIPSGKQKENHPKPGQHHGGAIRTAYLPDNTEGNEVLLLLKKAFDQKLIFTVGASRTTGA
DNMVTWNDIHHKTSMTGGPECYGYPDENYLSRVKEELKAKGIQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaaccaagaggaacccatggactatgacgaccagggtcagtcagccaaccaa
gctcaggctcctatggatcctccaacagatcaagaaaaagtcctactgactgtctcgttg
aagtggttggataaaaccaaaaagaaggcagatctacaaaaatccctccagacttggttc
aataaattcaaaactaaaatagactgcacagttaaagtggtcttaccagatggacgagct
gtgattgtggtttcacctcctccaggcctcacagagattcagaagctgagtggtaaaaat
cttcacacaaaagataagaaagaatttgtcaccattctgtctgtaatggtgggagaacca
aagcaggatccacaaacagcaaacgatgcttcagtgactccgactcctccagctgtttca
gtaaacaccaaagatgctgattctgagccgccagctgataaagcacatgttgacggtcag
aagaaaccagtttctacaccaggagaccctcctgctgagaatcaaacgatggatgaaagt
tgtgttctgtcagtgaatcaattcttgtatgtgagccacatcttcaaggagaagctgcag
cgcatacaggatgagaatgaagttgaaatcaggccagaggtcactgtgaaatttgaatcc
aagcgtaaagatggaaaaccaaatgaagcaaagacaaagttcacagatgttgtccaggaa
tgcttggctgatttcaatggttcagttttttctctgagttctgcagagccagatcagttg
aacagagcgttgaaagtcatcatgaacaaggaaaacaaacttttagccaacatatcctct
gaggaaatgacagtttttggaccaagtggacaacggatggttcttgattcaatgttaaaa
acatcacataaaaccagcagtggttatgaagagtatgatcgtcagtcttcgactccaaac
ttcaatagtgatctcctggtgaaaatcaacatgacaatcaaagatgatcttgctgataaa
ggtctgaccatagataaggaccagtggaaaagcctgaagtcgtcttatgataatcacctt
acagtgatcaaagataagttcaatgtggattttaaagaatccagcatcagggacggcaaa
gttaatgtccaaccatcatataaaggacatggaggaaacccagcaatggagagccatgct
gtcagagctctgctgcgtctgtaccaaaagattagagtgtcatccaggccaattcctcca
ccttatcgtgccactaggctcagtggttctgaagaggcgtccaatggagctggagttaat
gataattcaacacaaaacaataaaaaatcagcagcagagggtgcaacaggggacaacaaa
gatgacacatgttcaatttgtttgtctgattttaccaataagaagcagctgaattgtaaa
catgcattttgtgaggagtgcctgaaaaatgcattgaaacacagtggacccatctgtcca
atttgtaaggatgtttttggtgagatgaaaggaaaccaacctgatggaacaatgagttgg
agtacaaatccctaccctttacctggattcccaaaatgtggccatatatgcatcacctat
cacattccaagtggaaaacagaaggaaaatcatcccaagcctggccaacaccatggagga
gctatcagaactgcatatcttcctgacaacacagagggaaatgaagttcttctactactg
aaaaaagcttttgaccagaagctgattttcactgttggagcttcgaggacaactggggcg
gataacatggtgacctggaatgacatccaccacaagacgtccatgacaggaggaccagag
tgttatggatatcctgatgagaactacctgagcagagtcaaggaggagctgaaggccaag
ggcatccagtga
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