Poecilia reticulata (guppy): 103465626
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Entry
103465626 CDS
T05149
Symbol
rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103465626 (rfx1)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Other basic domains
RF-X
103465626 (rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
DUF3156
Spc42p
Motif
Other DBs
NCBI-GeneID:
103465626
NCBI-ProteinID:
XP_008408853
UniProt:
A0A3P9MT71
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Position
LG1:11920165..11936109
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AA seq
845 aa
AA seq
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MATCGYSEDLQPQQANAVTIATPATTTPSSAKTAHFLSELPAASGSVSSASQAARASKAG
QDALCSQAPPTQSQKAVVPTTPTQHYVGPDIQHAAVQKSNGQSASPQYIIVTVTEGSAHS
NDSLSDSSPPAPGIPTQVVQAVQTPPQRSVLQALTQPTKRIQTGHISSLQSVHINQEVEH
IYSDQVQYVDGAEDAAFTTSAIRSNSFPFSDSPLYTQTPPASSSAFYEATPSPDSDLPGS
VTSQAVSVATAGANSGAGAAGAAGYVIQGGYLLGGGGAAAGGGGGAQSYSSPNSRAPPAT
VQWLLENYEGAEGVSLPRCTLYYHYILHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGT
RGNSKYHYYGLRIKSGSPLLRLMDEQQHLAMRQQPFSQKNRIKPLQKTQGIANGTSGVAG
QQQAAALSDISAQVQQYQQFLEASKLLPEFVKIDLQDQALPDGIHLEHLKAFQALYREHC
EAVLDVMINLQFTLVETLWKSFWRFSQSNDTESLNLHDESEKRLPRSCLVALCKFEPVLR
WTRDCDNLLYQTLVEILIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRIKV
VCVGSFSQTLRRYTSLNHLAQAARAVLKNSAQINQMLSDLNRVDFTNVQEQASWVCQCED
RMVQRLEQDFKTTLQQQNSLEQWASWLDGVVSQVLKPYEQNPASLPKAAKVFLLNWSFYS
SMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAKAKGETPIAVMGEFASTVKNRN
SPDLDKEEEEDDDEEDSEEESGEIMLQSSSLKVDEEKCDLEPPAKQPRTSLNLHHALTQA
HGASP
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttgtggatactctgaggaccttcagcctcagcaggccaacgcagtaaccata
gcaacgcctgctaccaccacgccctcatctgccaaaactgcacacttcctgtccgagctc
ccggcagcctctggaagcgtttcgtcggccagccaagcggccagggcctctaaagcagga
caggatgcactttgttcacaagcgccacccacccagagccagaaggcagtggtgccaact
acgcccacgcagcactacgtgggccctgatatccagcacgctgctgtccagaagagtaat
ggccagagcgcttcgccccagtacatcatagtgactgttacagagggttcggctcactcc
aacgacagcctgtcggactccagcccacctgctcctggcatccccactcaggtggtccag
gccgtgcagactccgccacagaggtcagtgttgcaggcattgacgcagccaaccaaaagg
attcagacaggccacatcagcagcctgcagtctgtgcatattaaccaggaggtggagcac
atttactcggaccaggtgcagtacgtggatggggcagaagacgcggcgtttaccacatcc
gcaattcgatcaaacagcttccctttctccgactcgccgctctacacccagacccctccc
gcgtcctcctccgccttctacgaggccacgcccagccctgactcagacctccccggatct
gtgacttcgcaggcggtttccgtggcgacagcaggagccaacagcggggctggcgctgcg
ggagcagcgggatatgtcatccaggggggctatctgttgggaggtggaggcgcagcagca
ggtgggggagggggagcacagagttactctagccccaactctcgcgcccctcccgctact
gtccagtggttattggaaaactacgagggggctgaaggggtcagcttgccccgctgcacc
ctctactaccactacatcctgcactgccaggagcagaaactagagccagttaacgccgcg
tcttttggtaaactcatcaggtccgtcttcatggggctccgcacgcgaagactgggcacc
agaggaaactccaagtaccactactacggcctgcggatcaaatccggctcccctctgctc
agactcatggatgagcagcagcacttggccatgaggcagcagcctttctcacagaaaaac
aggataaagccactgcagaagacacaggggatcgctaacggcacatcgggcgtggcgggt
cagcagcaggcggcggctctctctgatatttcagcccaggtgcaacagtaccagcagttc
ctcgaagcatcgaagctgctgccagaattcgtgaaaattgatctgcaagatcaagctctg
cctgacgggatccacttggagcacctgaaggccttccaggctctgtacagagagcactgt
gaggctgttctggatgtgatgatcaaccttcagttcactctggttgagactctgtggaaa
tccttctggaggttcagccagagcaacgacacagaatcgctcaaccttcacgacgagtct
gagaaacggttgcccaggtcctgtttggtggctctgtgcaagtttgaaccggtgctgcgc
tggacccgggactgcgacaacctgctctaccagacgctggtggagatcctgatcccagac
gtgctgagacccatccccagtgccttaactcaggccatccgcaactttgccaagagtctg
gagaactggctgacgggcgccatgatgaacatccctgaggaaatggttcgcatcaaggtg
gtgtgcgtgggctcgttctcccagacgttacgccgctacaccagcctgaaccatctggcg
caggccgcccgcgccgtcctcaagaactcggctcagatcaaccaaatgctctccgacctc
aaccgtgtcgatttcaccaacgtgcaggagcaggcatcctgggtgtgtcagtgtgaagac
cgcatggtccagcggctggagcaggacttcaagaccacgctgcagcagcagaactccctg
gagcagtgggcatcctggctggacggagtcgtctcccaggtgctgaagccctacgagcaa
aacccggcgtcgctgcccaaggcggccaaagtctttctgctcaactggtccttctatagc
tccatggtgatccgggacctgactctgcgcagcgccgcaagtttcggctccttccacctg
atccgtctgctgtacgacgagtacatgtactacctgatcgagcacagggtggccaaggcc
aaaggggaaacgcccatcgcggtaatgggagaatttgccagcaccgttaagaacagaaac
tctccagatctggataaagaagaagaagaggacgacgacgaggaggacagtgaggaggag
agcggcgagatcatgctgcagtccagctccctgaaggtggacgaggagaagtgcgacttg
gagccgccggccaagcagcccaggaccagtttgaacctgcaccacgccctgacccaggcc
cacggcgcatcgccctga
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