Poecilia reticulata (guppy): 103465746
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Entry
103465746 CDS
T05149
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103465746 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103465746 (exosc1)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103465746 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103465746 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
103465746
NCBI-ProteinID:
XP_008409094
LinkDB
All DBs
Position
LG1:11694128..11702073
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AA seq
204 aa
AA seq
DB search
MRWLSALPENMSPLRLCVPGEKLCSVEDCNQGTGVYQRHGYIYSSLAGYVMRKNEGEELP
VISVVRETEALLLPDVGAIVTCKVTGINSRFAKVXILYVGSTPLKDRFRGTIRKEDVRES
EKDKVDIYKSFRPGDIVLAKVISLGDVQSTYLLTTAENELGVVVAHSEAGAQMIPISWRE
MQCPQTNAKEFRKVARVQPEYLEA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggctctctgctcttcccgaaaacatgtcgcccctgagattgtgtgtcccaggt
gagaaactgtgcagtgtagaagactgtaatcaaggcaccggagtgtatcagcgacatggc
tacatctactcctccctcgctggctacgtaatgaggaagaacgagggagaggagctgccg
gtgatctcagtggtgagggaaactgaagcactgctgctgccagaygttggagccatcgtc
acctgcaaggtgactggcatcaactcgaggtttgcgaaggtccawatcctctatgtgggr
tccacaccgctgaaagaccgcttcagagggaccatcagaaaggaagacgtgagagagtcg
gagaaagacaaggtggacatatacaaaagcttcagacctggtgacattgtcctggcaaaa
gtcatttcgctyggggacgttcagtctacctacctgttgacgacagctgagaacgagctg
ggcgtggtggtggctcacagcgaagcaggtgcccagatgattcccatcagctggcgtgag
atgcagtgcccgcagaccaacgccaaggagtttcgtaaagtggcccgagttcagcccgag
tatctggaagcctga
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