Poecilia reticulata (guppy): 103465763
Help
Entry
103465763 CDS
T05149
Name
(RefSeq) integrin alpha-11-like isoform X1
KO
K06587
integrin alpha 11
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04810
Regulation of actin cytoskeleton
pret04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103465763
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103465763
09142 Cell motility
04820 Cytoskeleton in muscle cells
103465763
04810 Regulation of actin cytoskeleton
103465763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103465763
Cell adhesion molecules [BR:
pret04515
]
Integrins
Integrin alpha subunits
103465763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_2
FG-GAP_2
LYRIC
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
103465763
NCBI-ProteinID:
XP_008409113
LinkDB
All DBs
Position
LG6:complement(4071724..4199123)
Genome browser
AA seq
1194 aa
AA seq
DB search
MDYHHVLVLWMCTLWPDLQLCFNFDTKNYKIFHXSIEAQFGYTVQQHEAGGRQWLLVGAP
FEYTGQLQTGDVYKCPLDIKSSSNCSRLDLGKLSLDNVSERKDKMRLGMTLTSNSKDNSF
VTCGPLWSHECGSSLYSTGICTKANQHFKLTQTIAPALQRCETFMDIVIVLDGSNSIYPW
YEVQNFIMNILQKFYIGPGQTQVGVIQYGSTVVHEFSLGEYHTAEDVLDAAKNIDQRGGE
ETRTALGISVARLEAFQRGGRPGAQKVMIVITDGESHDSPQLMEVVNQSKKENITMYAIA
VLGYYNRRGINPEAFLKEIKFIASDPDEEHFFEVTDESALKDIVDALGERIFSLEGISSQ
GKGFGLQMAQAGFSSHLVNDGVLLGAVGAYDWNGAVLKETKRGKVVSQKSSYKDEFPEAL
KNHAAYLGYSVDAVISSRGSQLYIAGAPRFNHTGKVIIFTLKNNGNLTILQALLGQQIGS
YFGSELLSMDIDGNGYTDFLLVAAPMYYSQGLERGRVYIYSLSSEAFFTFHGVLEVPHHS
QNSRLGSALAQIADMNGDGYKELVVGAPLEDDHQGAIYIFHSQNKMIGSYHKQRISGAGF
SAGLLYFGQSIHGVLDVNGDGLVDLAVGALGAAVIIWSRGVVRIEVKMTFEPEKINIFNK
NCQRGGKEVTCMSLVVCLKLDSMTKNKKDYRKEVAVWYSLVFDERRFSSWAVLDESFRQQ
PRTLLLHTGNQKCERLDFSVQDITDYRRPIVVAVEAGLQSQVKGPVLDPDWPTTLRTELQ
FWNGCEEDTCTPDLILHSRTDLLNVLHFCSTRKHATSSLCSHQKGHEEKMFVVETGRRKM
IVFAELQNQGENAFRTSLDISTTPNLLFSSLLVKDQSDIQIECSTENRMASQRSCNISAP
FMRSLSQVTFHLELEFSRSIFLHLAQVTMVTTSEGEDGYPDDNTNNIILPLKYQADLLFT
RDTDPHRFEIRSGLYSSSGKEPDTAFPTFILTFNVQNLGIFFVKDIILEADIWSVTKEGN
QLVDITDYSIEEQGTNSSCMLPPIKTTALGKPEDLTHLSQLNSSNSVSIPLHCMLSLSPS
KALKLTFTGRLHLPTLQAVSFRSLELLTVTTIQLEKTNPMFLQEDILVRQTILDLRKEGP
SSIPIWIILGSSLGGLLLLCLVILGLWKLGFFKRRRRQEKEEQSVTNGNAEKQL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggattatcaccacgttcttgtgctgtggatgtgcaccctgtggccagatcttcagctc
tgcttcaactttgacacaaagaactacaagatcttccacrgttctatagaggctcagttt
ggatacacggttcagcagcacgaggcaggagggcgccaatggttgctggtcggggctccc
tttgaatacacaggacaactgcaaactggtgatgtttataaatgtccactggatatcaaa
agctcttcaaactgcagccgtcttgaccttggaaaactttctctggacaacgtgtcagag
aggaaagacaagatgagactaggaatgacactgacctccaactccaaggataacagcttt
gtgacttgtggtcctctctggtcccatgaatgtggaagttctctgtacagcactggaatc
tgcaccaaagccaaccagcacttcaaactcacccagactattgcaccggctctacagagg
tgtgaaacatttatggacattgtcattgttctggatgggtccaactccatttacccttgg
tatgaggtgcagaactttatcatgaacatcttgcagaagttctacattggcccaggtcag
acacaggtgggagttattcagtatggctccacagtcgtccatgagttcagtttgggtgaa
taccacacagcggaggatgtactggatgctgccaagaacatcgaccaacgaggtggagag
gagaccaggacagcactggggatcagtgtggcacggttggaggcattccagcgtggtggc
aggccaggagcacagaaggtgatgattgttatcacagatggtgaatcacatgacagtcct
cagctgatggaagttgtcaatcaaagcaagaaagaaaacatcaccatgtatgctattgca
gttctgggttattacaatcgccgtggaataaaccctgaggcatttcttaaagaaatcaag
ttcattgccagtgatcctgatgaggagcatttcttcgaagtcacagatgagtctgcactg
aaggatattgtagatgctcttggagaaagaattttctctttggaaggcattagcagtcag
ggtaagggatttggtctgcagatggctcaagctggtttctcttcacatttagtcaatgat
ggtgttctgcttggggcagtgggtgcctatgattggaatggtgcagtgctaaaggaaact
aaacgtggtaaagttgtttcacaaaaatcctcttacaaagatgagtttccagaagctctg
aagaaccacgctgcttatttgggctattcggtggatgctgttatttcatctcgtggctct
cagctttacatagctggagcgccaaggttcaaccacactggcaaggtcattatattcacc
ctgaagaacaatggaaatctcactatcctgcaggcacttctgggacagcagattggttca
tattttggcagtgagctgttatcaatggacattgatggaaatggctacactgactttctt
ttggttgcagcacccatgtattacagtcaaggcttggaaagaggaagggtttacatttac
tctctatcatctgaggcattcttcacatttcatggagtacttgaagttccccaccattct
caaaactctcgtctgggttcagcgctggcgcaaatagctgacatgaatggagatggctat
aaggagcttgtggtgggagcgcctctagaagatgaccatcagggagctatttatatattt
catagccagaacaagatgattggatcataccacaaacagcgtatttctggagctggtttt
tctgcaggtctgctgtactttggtcaaagtattcatggagttctggatgtcaatggagat
gggcttgttgatttggctgtgggagctctaggagctgccgtcatcatctggtcccgtggc
gtagtgcgaattgaagtcaaaatgacttttgaaccggagaagatcaacatctttaataag
aactgtcaacgtggtgggaaggaggtcacttgcatgtcacttgttgtctgtctgaaattg
gacagtatgacaaaaaacaagaaagattacagaaaggaagttgctgtttggtacagtctg
gtttttgatgagaggcgattttcctcctgggcagtcctggatgaatcattccggcagcag
cccagaactcttcttctacacactgggaatcagaaatgcgagcgcctcgacttttctgtg
caggacataacagattacaggcggcccatagtagttgctgtggaggcaggacttcagagc
caggtcaaagggccggtgttggacccagactggccaaccaccttacgaactgagcttcag
ttctggaatggatgtgaggaggatacctgcactcctgacctcatcctccacagtcgcacc
gacctgttaaatgttctgcatttctgcagcacaaggaaacatgccacctcctcactctgc
agccatcagaagggacatgaagagaaaatgtttgtggttgagactggacggaggaagatg
attgtgtttgctgagcttcagaaccaaggggagaatgcattcagaacttcactcgacatc
tccacaacccctaaccttctcttctcaagtctcttagtcaaggaccaatcagatatccag
attgagtgttccactgagaataggatggcctcccagagaagctgtaacatcagtgctcca
ttcatgaggtcattgtcgcaggtaacttttcatctggagttggagttcagccgttccatc
tttcttcatttggcacaagtaaccatggtaacgactagtgagggagaggatggataccca
gatgacaacaccaataacattatcctccctttaaaatatcaagctgaccttctcttcacc
agagacaccgatcctcaccgctttgagatcagatctgggttgtactcttcttctggaaaa
gaaccagacaccgccttcccaaccttcattctcacgtttaatgttcagaatctgggaatc
ttctttgtaaaggacatcattttagaagctgatatctggtctgtgaccaaggagggcaac
cagctggtggacattacagattatagcatcgaagagcagggaactaattccagctgcatg
ctacctcctatcaaaactactgctctgggtaaaccagaggatctgactcatctgtctcag
ctgaactccagtaacagtgtgagcataccgcttcactgcatgctcagcctgtcaccctcc
aaggcgctgaagctcacattcacaggaagacttcatctaccgactctgcaggctgtgagt
ttcaggtccttagagctgctgactgttaccactatacagctagagaagaccaatcccatg
tttcttcaggaggatatccttgttcgacagaccatcctggatctcagaaaagagggaccc
agctccatccccatctggatcatcctgggcagctccctgggaggcctgctgctgctctgc
ttagtcattctgggtttatggaagcttggattcttcaaaagacggagacgtcaggaaaag
gaggagcagtccgtcactaatgggaatgcagagaagcagctataa
DBGET
integrated database retrieval system
