Poecilia reticulata (guppy): 103465852
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Entry
103465852 CDS
T05149
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103465852
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103465852
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103465852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Siah-Interact_N
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
103465852
NCBI-ProteinID:
XP_017160640
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Position
LG6:6577684..6646660
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AA seq
716 aa
AA seq
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MGCNLCTLQKREEHYKLLYEIAQVNGKELSKSSHDETVEAFRAARDPVVVQVIRRTPSGR
PHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYY
EGTDYLSPVPADGDRTEEFEYEEVELCRLSCHEKLGLTLCYRTDEEEDVAIYVSEVSPNS
IAARDGRIREGDRILQINGTDVQDREEAMAALSSDDFRNIVLLVARRSEDDKPSCSTFSY
SRDSLPSLKERKENSDHNVLAQIQRRLSRCLRDSQDSHCTSGSKRLEDKDDEDNDESEGD
RFQQLLELKCQIRNSGEYDLFYSRRSTIECSMAEQSDVQHELRMLNEELRSIELECQNIM
QAHKLRKSQQSPLMGRSAPSIKSQSPKHGESVKGKLGDINXRMEKSDKDSSSAYNTAESS
RSTPLAMDRSPEHSLQRMVSLTNQRNLYGGFATGHSPSPSPLPPCRTPVLGKSSSPDHSN
PSESDQTPQAEEEGKRKLKQCTSQIPYFSPSHSSQQRQTNIPAHARHYQSYMQLIQQRSA
VEYAQSQLSLLSVCKEPQRPINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEE
RSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMQRSRLESLRENPQSSXE
GRKEVSIIELSHKKMLKKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaagcgagaggaacactacaagctgctgtacgag
attgcacaggtgaatgggaaggagttgtccaaatccagccacgatgagactgtggaggcc
ttccgagctgccagggaccccgtcgtggtgcaggtcatcaggcgtaccccgagcggccgc
ccccacggcccccctcaggaaatccatgtggtggatgtgtgcactcagaccgacatcacc
tttgaacacatcatggcgctggcaaagctccggccttcaacccctcctgtgcctgacgtc
tgtcccttcctgctctctgacagctgtcattcccttcatacaatggaccaagattactat
gaaggtaccgactacctctcccccgtcccagctgacggagacagaacggaggagtttgag
tacgaggaagtcgaactttgtcgtctcagctgtcatgaaaaactaggcctcactctgtgc
tatcgaacggacgaagaggaggatgtggccatctatgtcagtgaggtcagccccaacagc
attgccgccagagacgggcggatccgagaaggggatcgaatcttacagataaacggcact
gatgtgcaagacagagaagaagcaatggctgctctctccagtgatgacttcaggaacatc
gtactactggtcgcccgaagatccgaagatgacaagccttcctgttcaacattttcttac
tcaagagacagcctgccaagtctgaaagagagaaaggaaaactcagaccacaacgtctta
gcccaaatccagagacgcctgtcccggtgcctacgggacagtcaggactcccattgcacc
agcggtagcaagcgactggaggacaaagaygacgaggacaacgatgagtcagagggagat
cgtttccagcaacttttggagctaaaatgtcagatacgcaacagcggcgagtacgacctt
ttctacagccgccgcagtactattgagtgcagcatggcggaacagagygatgtgcaacac
gagctgcgtatgctaaacgaggagctacgcagtattgaacttgagtgccagaacattatg
caggcccataagctgcgcaagagtcagcaatctcccttaatgggacgttctgcaccctcc
atcaaaagtcaaagccccaaacacggggagtctgttaagggtaagctgggtgacattaat
rwgaggatggaaaagtctgacaaagacagctccagtgcctacaacactgccgagagttct
cggagcacgcccttggccatggaccgctccccagagcactctctccagagaatggtcagc
ctcaccaaccagaggaacctctatggcggctttgctaccggccactcaccaagcccgagc
cccttaccgccctgcagaacccccgttctgggcaaaagcagcagccccgaccacagtaac
ccttcagagtcwgatcagacacctcaggctgaggaggagggtaaaagaaagttaaagcag
tgcacttcccagattccttacttctccccttcccacagttcccagcagaggcagaccaac
attcccgcccatgcccgccactaccagagctacatgcagctgatacagcagcgttcagct
gttgagtacgctcagagccagctcagcctgcttagtgtctgcaaagagcctcagaggccc
attaacgaacccaagatggagtggaaagtcaagattcgcagcgacggcacccgctacatc
accaagaggcccgtgagagacaagatcctgagggagcgggccttgaagataaaagaggag
cgcagcggagggatgacgacggacgacgatgcaatgagtgagatgaagatggggaggtac
tggagtaaagaggaaaggaagcagcacctggtcagggcaaaagaacagaggagaagacga
gaattcatgcagcgcagtcggctggaaagcttgagggagaaccctcagagcagcarcgaa
ggtcgaaaggaagtcagtattatagagctcagccacaagaagatgctgaaaaaacgcaat
aagaagattttggacaattggatgaccattcaggagctgatgacacacggcactaaggcc
cccgagggagcaaaggtgcacaatgccttcctctcagtcactactgtatag
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