Poecilia reticulata (guppy): 103465872
Help
Entry
103465872 CDS
T05149
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04621
NOD-like receptor signaling pathway
pret05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103465872 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103465872 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pret04054
]
103465872 (nod1)
Pattern recognition receptors [BR:
pret04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103465872 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_4
CRS1_YhbY
AAA_16
NPHP3_N
AAA_22
ABC_tran
RsgA_GTPase
ATPase_2
NB-ARC
Roc
Motif
Other DBs
NCBI-GeneID:
103465872
NCBI-ProteinID:
XP_008409283
LinkDB
All DBs
Position
LG6:complement(8586546..8598675)
Genome browser
AA seq
941 aa
AA seq
DB search
MGQVEEARVSCLDLLTCHRELLVSTLSSIQCLLDNLLANRFFCEEDVEIVQRTVTKPNQV
RKILELVQCKGEDACEFFVFIIYKICDAYIDLQPWLKEINYKPSGDMEEMKVVNTDPISR
YCEKQRHEMSRDTSFIMSYGQQDETRLEDLYTDTVMELFNDANESLGFIQSLNQLLGEDG
VFNPQGEIIYVMGDAGVGKSILLQKLQNLWSKKELQTDAIFFFKFRCRMFSIFKEADQMS
LRDLLFKYNCYPDHDPDNEVFDYILRFPDKVVFTFDGYDEIQEDIDLMNVPEVVSPEDKA
NSLQLLLSLLCGKLLKGSKKILTTRTGIELQSRVIKKKVVLRGFSPDHLKTYIKLQFKEQ
EHRDLVSVQLDASPHLCGLCSTPLFSWIVFKSFRHLHTMHDTFHLPETSITLTNIFLLLS
EVFLSRLATPASPLLKKSTRCTSETFRVGLRSLAGFAKLALQGLERGSFLCSQEEISECD
LTEEDMALGFLRPISEFDANDAPATFEFIHITLQSFLAAFALVLDEQTSGNSILKFFTEC
SRRREPCCLPLAFCTRRFVKPCEKKPSSTNEHLQFTNLFLSGLLSKTQASLMGLLVSPVL
LKKKRALLKAYLSSSVKVHLEGLPCHTGDGLNKVHVLPHFLWILRCIFETGSKDVAKMTA
KGITASFIKLGYCNVYSGDCTAINFVLQHRQKHLGLDMDNNNISDYGVKQLQPSFCKMTV
VRLCVNNLTDRSIEVLAEELCKHKVVKVLGLYNNNITDAGAKLVAQIIEECPQLAVVKIG
KNKITPVGGRYLARAVKKSASIFDLGMWGNSIGDEGAEAFAEALRNHPRLTNLSLAANGI
TSNGGKCLAEALKENTVLRIFWLVQNEMMDDSAPHWAELIQADTGLSHLWFINNKFTAAG
IQHFAEALATNSKLKEICVKGNQLSEEEQKRFESDKRLLFH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggtagaggaagccagagtgtcgtgccttgacctcctcacgtgccacagagag
ctgctggtttccacgctcagcagcattcagtgcctcctggataacctactggccaaccgc
ttcttctgcgaggaagacgtggagatcgttcaacgaaccgtcaccaaaccaaaccaggtg
cgcaaaatcctggagctggttcagtgcaaaggagaggatgcctgtgaattctttgttttt
atcatatataaaatatgtgacgcatatatagacctgcagccatggctaaaagagatcaac
tacaagccaagcggagacatggaagagatgaaagtggtgaacaccgaccctatcagcagg
tactgtgagaagcagcgacatgagatgagccgagacaccagcttcatcatgtcttatggg
cagcaagatgagacccgattggaagatctctacacagacactgtgatggagctgttcaac
gacgctaatgaaagtttaggcttcatacagagtctgaaccagcttcttggagaagacggg
gtctttaatccccaaggtgaaatcatctatgtgatgggggatgctggtgttggaaagtcc
atccttctacaaaagctccagaacctttggtccaaaaaggagctgcagacagacgccatc
ttctttttcaagtttcgctgtaggatgttcagcatcttcaaggaagcagatcagatgtcc
ctcagagaccttttattcaaatacaattgttacccagatcatgatccagataatgaagtg
tttgattacatcctgcgcttccctgataaggtcgtgtttacttttgatggctatgatgaa
attcaggaggacatagacctgatgaatgttcctgaagttgtgtctccagaagacaaggca
aactccttacagttgctcctcagcttgctctgtggaaaactacttaagggctccaaaaaa
atactgacaacccgaaccgggattgaattgcaaagtcgagtcattaagaagaaagtagtt
ttgcgtggattttctccagaccatctaaagacgtacatcaaactgcagttcaaggagcag
gagcaccgggacctggtgtcggttcagctggatgccagccctcacctttgtggcctgtgt
tccactccactcttcagttggattgtattcaaaagtttccggcacctgcatacgatgcat
gatacctttcatctgcctgaaaccagcatcacgctaacaaacatattccttctgctgtct
gaggtgtttctcagccgcttggccacccccgcttctcccctgctgaagaaaagcacccgc
tgcacctccgagacattcagggtggggctcaggtcccttgctgggtttgctaagctggct
ttgcagggtttggagagaggaagctttctgtgcagccaagaggagatcagtgagtgtgat
ctcacagaggaggacatggccctaggtttcctcagacccattagtgagtttgatgccaat
gatgcccccgctaccttcgagttcatccacatcaccctccagtcgttcttggcagcattt
gctcttgtgttggacgagcagacttctggcaactccatcctcaagttcttcacagaatgc
agcaggaggagagaaccctgctgtctccctttagctttctgtaccaggaggtttgtgaag
ccttgcgaaaagaagccctcctcaacaaacgagcacctgcagttcaccaatctgttcctg
agtggactgctgtcaaagactcaagcaagtctgatgggactactggtatctcctgtttta
ttgaagaaaaaaagagccttgttgaaggcttacttgtccagtagcgtcaaggtccacctg
gagggcttaccctgtcatactggtgatggattgaacaaagttcacgttttgccccacttt
ctttggattctacgatgcatcttcgagacagggagcaaagatgttgctaagatgacagca
aaaggcatcacagcaagttttatcaagctgggctactgtaacgtgtactcaggtgactgc
acggccataaactttgtgctgcagcaccgccaaaagcacctggggctcgacatggacaac
aacaatatcagtgactatggggtgaagcagctccagccttcgttttgcaagatgacagtt
gtaagattgtgtgtcaataacctaacagacaggagtattgaggttctggcagaagagctg
tgcaaacacaaggttgtgaaggttttggggctttacaacaacaacatcactgatgctgga
gccaaactggtcgctcagatcattgaagaatgtcctcagctggcagttgtgaagatcggt
aaaaacaagatcacacctgtgggtgggaggtatctggccagggcggttaagaagagcgct
tccatattcgacttggggatgtggggcaacagcatcggtgatgagggagctgaagctttt
gcagaagccttgaggaatcacccacgtctcaccaacctcagcctggcagccaatggcatc
acatccaatggaggaaagtgtctggcagaagctctgaaggagaacacagtcctgaggata
ttctggttggtgcagaatgagatgatggacgattcagctccacactgggccgagttaatc
caggccgacactggactgagtcacctctggttcatcaacaacaagttcacagctgctggg
atccaacactttgctgaagcgctagctaccaactccaagctcaaggagatctgcgtgaaa
ggaaaccagctctctgaggaggaacagaagcggtttgagtcggacaaacgactcctgttc
cactga
DBGET
integrated database retrieval system
