KEGG   Poecilia reticulata (guppy): 103465993
Entry
103465993         CDS       T05149                                 
Symbol
smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pret  Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:pret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pret03041]
    103465993 (smu1)
Spliceosome [BR:pret03041]
 Complex B
  Other components
   Complex B specific factors
    103465993 (smu1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_DCAF4 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SCAP TFIIIC_delta Beta-prop_VPS8 eIF2A Nucleoporin_N Mala_s_1-like Beta-prop_IP5PC_F WD_LRWD1 LisH
Other DBs
NCBI-GeneID: 103465993
NCBI-ProteinID: XP_008409475
UniProt: A0A3P9N9Z2
LinkDB
Position
LG1:complement(17801959..17814256)
AA seq 511 aa
MAVELEPTDVIRLIMQYLKENNLYRTLMTLQEETTVSLNTVQSIESFIEDINRGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMILLNQTEPERYAHLEKL
LTCPYFDPREAYPKGSSKEKQRRAIAEALAREVSVVPPSRLIGLLEQVSYMKRQINPGYL
SPEMTIDTLTNKEQQAEKESFPSQLYRHIKFGRRSHVECARFSPNGKYLITGSVDGFIVF
WNFNSGKICKDLKYQAQESFMMMDDAVLCMCFSQDVDLLATGAQNGKIKVWKIQSGLCVR
RFEHAHSKGVTCLSFSKNSDHILSASFDQTIRIHELRSGKTLRELKGHSSFVNDACFAQD
GFHIISASADGTVKIWSTKSCECIHTFKSQSMTSEVPVNNVIPLPQKPEEFVVCNHSSMV
VIMNMHGQTVKTFCSEQPERAGFVCCAVSPHGEWIYCVGEDSVLYCFNYTTGRLEKTLTV
HHKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagctggagcccactgatgtgatccgtctgatcatgcagtacctcaaggag
aataacctctaccgcacgctgatgaccttacaggaggaaaccacggtttctctcaacacc
gtgcaaagcatcgagagctttatagaggatataaacaggggccactgggactctgttctg
ctggccattgagtctctcaagttgcctgacaacacactgattgacctctatgaacaggtt
gtaatggagctcattgaaatgagggaggtgggtgctgcccgttcgctcctcagacaaact
gacccaatgatcctgctgaatcagaccgagccagagaggtacgcccatctggagaaactg
ctgacgtgtccttactttgaccctcgagaggcgtacccaaagggcagcagtaaggagaag
cagcgcagagccatagctgaggctttagcgagagaggtcagtgtggtgcctccttctcgc
ctcattggactcctggaacaagtcagctatatgaagcgacagataaatccaggttatctt
tcccctgaaatgacaatcgacacattgacaaacaaggagcagcaagcggagaaagaaagc
tttccatctcagctgtaccgacacataaagtttggacgacgttcacacgtggaatgcgcc
cggttctcacctaatgggaaatatttaatcaccggatcagtggatgggtttattgtgttc
tggaacttcaacagtggaaaaatttgtaaggatctcaagtatcaggcccaagaaagcttc
atgatgatggacgatgctgtgctgtgcatgtgcttcagtcaagatgtagatctactggcc
acaggagctcagaatggcaaaattaaggtgtggaagatccagagtggcctgtgtgtgcga
aggttcgagcacgctcacagcaaaggcgtgacttgtctgagcttttcaaagaacagcgac
cacatcctcagtgcctcatttgaccaaaccataagaatccatgagctgaggtcaggcaag
acgctgagggagttgaaaggacattcatcgtttgtaaacgacgcgtgcttcgctcaggac
ggttttcacatcatcagcgcctcagccgatggcactgttaagatttggagcacaaaatcc
tgcgaatgcattcacacgttcaaatcccagtcaatgacgtcagaagtcccagtcaacaat
gtgattcctcttccccaaaagcctgaggagtttgtggtgtgtaaccactccagcatggtg
gtcatcatgaacatgcacggtcagacagtgaagactttctgttcagagcagccagagaga
gcaggctttgtgtgctgcgccgtgtcaccccacggggagtggatctactgtgtgggggag
gacagcgtgctgtactgttttaactacacgacagggaggctggagaaaacgctgactgtt
caccacaaagatgtaattggcatcgctcaccacccacatgagaacctgattgccacatac
agcgaggatggcctgttaaggctgtggaaaccttaa

DBGET integrated database retrieval system