Poecilia reticulata (guppy): 103466089
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Entry
103466089 CDS
T05149
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103466089 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103466089 (dhx15)
03009 Ribosome biogenesis [BR:
pret03009
]
103466089 (dhx15)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103466089 (dhx15)
Spliceosome [BR:
pret03041
]
Complex A
U2 snRNP components
U2 related factors
103466089 (dhx15)
Complex B
103466089 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103466089 (dhx15)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
90S particles
Helicases
103466089 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
SRP54
AAA_25
Apis_Csd
AAA_29
nSTAND3
AAA_7
RSB_motif
Motif
Other DBs
NCBI-GeneID:
103466089
NCBI-ProteinID:
XP_008409682
UniProt:
A0A3P9NB62
LinkDB
All DBs
Position
LG1:17924253..17935266
Genome browser
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDEYSSSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDSKLLPAA
PSNSMPSMSSIPPIKQMNMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKDSFSDIITR
HQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRAVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRQDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHEANQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRA
LCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKIAPQYYDMSNFPQCEAKRQLERIIAKLESKEYTQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacaccgtttggatttgggcgatgagtactcctccagtaagaagcggtct
gacgggagagacagagaccgcgacagagatcgcgaggaccgttccagggacagggatcga
gacagagaccgcgacagggacagagaccgggacagggactccaagctgctgccggcagct
ccctctaacagcatgccgtcgatgtcgagcatacctcctatcaagcagatgaacatgcac
cagcagattaacccattcaccaatctgccacacacgccgcgctactacgagatcctgaag
aaaaggctacagcttccggtgtgggagtacaaagacagcttcagcgacatcattacacgc
catcagagctttgtccttgttggagagactggctctggaaaaacaacacagattcctcag
tggtgtgtggacatggtgagggccttgcctggtcctaagcgggccgtagcttgtactcag
ccgaggagagtggccgccatgagtgtggctcagagggttgcagacgaaatggatgtcatg
cttggacaggaagtcggctactccatcagatttgaggactgcagctctgccaagactata
ttaaaatacatgacagatggtatgttgctgagagaggctatgaatgatcctctgctggag
cgatatggtgtgatcattctggatgaggcccacgagcgaactctggccacagacatcctg
atgggcgtgttaaaggaagtggttcgccaaagacaggatctgaaggtaattgtgatgagt
gccaccctggatgcaggaaagttccaagtgtacttcgacagctgccctctgctgaccatt
cctggacgcacacatcctgtagagatcttctacacccctgaaccggagcgggactacctg
gaggcagctattcgtaccgtcattcagattcacatgtgtgaagaggatgaaggtgacgtc
cttctgttcctcacaggtcaagaggaaatcgatgaagcctgtaagagaatcaaacgagaa
gttgacgaccttggccccgaagtcggagacatcaaaatcattccactgtattccacattg
cccccgcagcagcagcagaggatctttgagccacctcctccaagaaaggcaaacggcgct
atagggagaaaggttgttgtgtcaacaaatatcgctgagacgtcgctaacaattgatggt
gtcgtgtttgtcattgaccctggatttgccaaacagaaggtgtacaatccccgcatcaga
gttgagtctctgctagtcacagccatcagtaaagcttcggcacagcagagggcgggaaga
gccggcagaacacgtcccgggaaatgtttccgtctctatacagagaaggcctacaaaaca
gagatgcaggataatacataccctgagattcttcggtccaatttgggttctgttgtgctg
cagttgaagaagttgggcattgatgaccttgtccactttgacttcatggaccctccagct
cctgaaacgctaatgagggctcttgagcttctcaattacctggccgctctcaacgatgat
ggtgacctgaccgagcttggctccatgatggcagaattcccgctggatcctcagctggcc
aagatggtcatagcaagctgcgagtttaactgctccaatgagatcctctccatcactgcc
atgctgtcagtcccacagtgttttgtccgtcccacggaggctaagaaggcagcggacgag
tccaagatgagatttgctcacattgacggagaccacttgacgctgctcaacgtctatcac
gccttcaaacaaaaccacgaagctaaccagtggtgttacgacaactttgtcaactaccgc
tcattgatgtctgctgacaatgtacgtcagcagctgtccaggatcatggaccgcttcagt
ctgcctcggcgaagcacagagtttaccagcagagattactacatcaatatccgacgagcg
ctctgcaccggcttcttcatgcaggtggctcatttggagcgcacaggccattacctcaca
gtgaaagacaaccaggtggtccagctgcacccatccacagttctggaccacaaacctgag
tgggtgctctacaacgaatttgttctcaccaccaagaactacatccgcacttgcacagac
atcaaaccagagtggttggtgaagattgcaccccagtactatgacatgagtaactttcca
caatgtgaagctaaaagacagctggagcgaattattgccaaactagagagcaaagagtac
acccagtactga
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