Poecilia reticulata (guppy): 103466190
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Entry
103466190 CDS
T05149
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103466190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103466190
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103466190
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103466190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
103466190
NCBI-ProteinID:
XP_008409834
UniProt:
A0A3P9QAA5
LinkDB
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Position
LG6:18090228..18099447
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AA seq
517 aa
AA seq
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MFGSRKPFPDFGDGVDNDLADDMYYNQSMFHRSDKDMLSSPSPSSSSQLSQLGVSLYGPQ
SAIGFPVRNMGNSTPQLNRNLTQGTQLASHITPTTGVPSLSLHTPSSPSRGTISRNILNH
SQVGQGIGLTGRTSSMGSSGLGSPNRSSPSIICMPKQQPARQPCTINSMSGFGMNRNQGF
GMNNSLSSNIFNGTDGSDNIMGLDLSDFPALADRSRREGTGNPTPVLNPLAGRAPYVGMV
TKPSTDQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKSTSSTDGPKFPGDKT
TSAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMVGLLTFIRAAETDPGMVHLALGSDLT
TLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGEDL
LFYLYYMNGGDLLQILAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYFFD
CLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttctagaaaaccctttccagatttcggcgacggagtcgacaacgacttggcc
gatgacatgtactacaaccagtccatgttccacaggtcggacaaagatatgttgtcctct
ccttcgccatcgtcgtccagtcagttgtcgcagctcggtgtgagtttgtacggtccacaa
agtgcaatcggcttcccagtaaggaacatgggaaacagtacgcctcagttaaaccgaaat
ctaacacaaggaacgcagctagcaagtcacatcaccccaacaacgggtgtcccctccttg
tccctacacaccccttcctcgccaagcaggggaacaatatcgagaaacatcctgaaccac
tctcaggtcggtcagggcatcgggttaaccggcaggaccagcagcatgggcagctcgggg
ctgggaagtccgaaccgcagctcacccagcatcatctgtatgcccaaacagcagccagcg
cgccagccctgcaccatcaacagcatgtcaggatttggtatgaaccgcaaccaaggtttt
gggatgaacaattcattatcgagcaacatcttcaatggcacagatgggagtgacaatata
atgggcctggatctgtcagacttccccgcattagcagaccggagtcggagagaagggact
ggaaatccaacaccggtgctgaacccgctggctggacgcgctccttatgttggcatggta
acaaagccatcgactgatcagacacaagacttctccatacataacgaggacttccccgca
ctgcctgggccaaattacaaagaccccacactcaacaacgatgacagcaaaactaacttg
aactccacaagcaagagcacatccagcacagatggtccgaagttccctggagacaagacg
acctcggcacagaacaacaaccagaagaaagggatccaggtgttgcccgatggtcgggtg
acaaacattccctcaggaatggtaacggaccaattcggcatggtgggtctgctgacgttt
atccgggccgcagaaactgatccggggatggtgcatctggcgcttggaagtgacctcaca
accctgggactcaacttaaattcaccagaaaacttgtatccaaagttcgcctctccttgg
gcttctgcaccatgtcgacctcaagacatcgatttccatgttccgtcggagtatttaacc
aacatccatataagggacaagttagctgcaattaagttggctcgatacggcgaagacctg
ctattctacctgtactacatgaacggaggggacctgcttcagatcctggcagctgtggag
ctcttcaaccgggattggagataccacaaagaggagcgagtttggataacgagggcgccc
ggcatggagcccaccctgaagaccaacacctacgagagaggcacctactacttcttcgac
tgtcttaactggaggaaagtagccaaggagtttcatctggaatatgacaagctggaagag
aggcctcacgtgcccacaacgttcaactacaatccagcccagcaggccttctga
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