Poecilia reticulata (guppy): 103466206
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Entry
103466206 CDS
T05149
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103466206
Cell adhesion molecules [BR:
pret04515
]
Cadherins
Cadherin related
103466206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
Cadherin_pro
EGF
hEGF
EGF_2
EGF_Teneurin
Big_9
Cadherin_4
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
103466206
NCBI-ProteinID:
XP_008409866
LinkDB
All DBs
Position
LG6:18480188..18613655
Genome browser
AA seq
2914 aa
AA seq
DB search
MIWGVLLCCLLMPAAGYKTQARLPFFHGHIFENSPAASKVNGLSITVKRIDAQKWCPVSG
MHFKLFGNGSEDFHVFAHHKRGNVLLKTSRVLDRESRSEYLLSVGLCCQTCASESAVFEV
ALVKVDVLDTNDHEPTLVSADSVHISLDDTTALRTVVYRLEAVDEDSGKNAELTFASVPK
NGSFYVVPKTGEVLLVDSILGLLSPITFYLYVRDHGWPPLTSKAVLVTVSPQRWMTRSAD
LVGPERAGRSPRALLESSTVLSLNVSEDAGIGSVLMSLNPTRFQSAAYELIYPESESSPV
TVGRDSGDITVTRRLDRETEPFLELTVKIQDKRGPDWYLNKVKLTITDVNDNXPEWNMKP
YPYLAVVSSEAVAGTFVYQLQAIDGDEGRSGEVEYFLSDGGDGCFAVDKKTGQVLTTGLI
LQGEREYLLSVVALDGLGSRSAPAMLSVVAGSRAPQFTNTSYAISIPENTPEGQPFLVVL
AISFQKEQISYSLLINPSSLFSIQQDTGEISLTRTLDYESDQRRYLLMVRASEEPGSLSA
ATEVQVLITDENDCVPEFLQSIYSVDGVPETVTTATSLLQVLATDCDSGLNAELTYYTLS
PDFSISPHGTVFPARRLDYERPNHLYEFVVMAVDSGDEPHSGTATVRVRMANVNDEAPEF
SQPVYRTFVSEDAGPNTLVATVLAKDPDGDSITYSITAGNEEGNFVIDSQKGLIRLRSTP
LPKLQGLEYVLNVTATDDNASGGPHSLTSTARVVVGVDDVNNNKPIFEQCQQYREQASVL
ENQPXGTFVLQVHAVDADEGANGKVKYGLMHRDSAMPAFRIHPDTGVIVTARRFDRERQR
EYSITVTATDWAEEPLIGICQLAIQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAA
HDDDFGTNAAITYSMSVEQPEYLRVNPVTGWVYVNQPISQRTYITRDIIATDGGNRNTSV
ELAVTITNVKNQPPQWEKDSYNVVIPENTARDTPIVTIKATSQLGDPRVTYNLEDGMVPE
TNMPVRFYLSPNREDGSASILVSEPLDYEITPFFSLRVRAQNVAAVPLAAFTRVYVNITD
VNDNVPFFTSSIYEASVTEGAQIGTSVLHVSAHDKDLGLNGEITYSLLSDSSGDHNFFXI
DPQNGIIYTEAVFDREARSSYLLEVQSEDGQESARPGKNKQPNTDTAYVRVFISDVNDNK
PVFAQRLYEVAVDENADVGLTVVTVSATDEDEGANAKLRYQITSGNKGGAFDIEPEVGTI
FIAQSLDYEKQKRYKLLVLASDGKWEDYAAVVVTIVNKNDEAPXFSMNEYYGXVTEELDG
SPVFVLQVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTVDREERAVWRF
VVMATDEEGEGLTGFTDVIINVWDINDNAPTFVCAPDNCHSSVAENSPPGTFVVEMTAVD
LDDAAVGQNAILTYRITDNAQNSDNANLFTIDSSTGTISVAAEGLDRELADSHHLVVEAR
DGGGMTGTATVTVVVTDVNDHVPKFSEDWCGARVPESXLEDSSLLELSAVDPDVGHYGQL
AFSVVAGDAEQRFYIVSHKLEQKSTLRLKKKLDFEHPDEQRFNLTIKVEDSNFASFIHCM
ILVEDENDNAPVFSPSSHLLSPVPEDVPVGTSIIQVVATDSDSGLNGDVFYSILPHSDPY
GHFTVNRGGVVTVTKSLDREMVAGYELVVIATDRGTPALTGSVTVHLPLLDMNDNGPELE
MLYSPVLWENGPAPQVVHLNGSSTLLHVVDKDTPQHGPPFLISLPSAYSADFHLQDHGDG
SATLTTLRRFDRERQSEYHLPVVMIDSGLPPITATSTLTITIGDHNDNAHQAGEKDVYVH
SRKGRMGNAALGKVYAPDPDDWDNKTYSLETSAAKYFSVNQSSGMLTVRQNTPPGSYWLR
VGVSDGVWPDVISGVRVHIRELEEKAILSSASLRLTGITAREFIDSNVEGKSRLEAFWDF
LSETLSVRPGTINIFSVADREARTVDIHFYVLTDNGYLRPEKLHSVLAAHKKKLQSLLRV
NVSQVQVDECVRTDCKKTGGCYTQLTVSDSPALIDFGALSLASVKVTSSAVCGCAAREMT
HRMCSYYPANPCLNGGTCVDTQNGYRCHCPPQLEGPDCQQTRLSFLGNGYAWFPPIRPCF
DSHLSLEFMTEEDDGLLLYAGPLATLLPGDNEDYIAIELIGGTPSLKINHGSGTLVLQLT
NVGVSDRRWHRLDVRSNSKEVRFTLDRCSSAIVMEAEGVDSWAMTEDRSSCEIRGVTPNR
DKYLNVSHVLQLGGINENISYEYPQLQHKHYTGCIRDLIVDSKLHDLGSPAESSNTLPGC
GLIDNHCADLEQLPSCGKRGSCHGEWGSFSCLCEKGFTGPHCDQVTPEFSFDGRSHVQLQ
LLWSLPARRTRVQVGVRTRALTGVILSLLSQEQSEYLRLEVIQGLLAVFYNLGDGDYNIS
LPYHRLDDGEWHEVELDRFGREFTLRLDRGGGRLEITASPGQSQEIIIDPSVVMLGNSFP
SGHNRSFFGCLRDVRFNGRSVPLDQDQHSEGLQVLVASQGVSVGCSSDACRKHHCSPPLV
CLDLWRQHDCRCPPGHMTRETSSGRACIYTLCASRPCRHGTCVAHSPSRYSCHCSEGYRG
RHCEVALAVLHSEDGSSLSLSSMFAISICVMAFLVLMLGLFLYSCWRRHKGLKEGVYHVS
AHHGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSLQPSPAQSLRYSYPQNTSSYPQT
KLPQDNNKKGMSNGNGNAAIALRLAIPPSEAETLSSPLTFRRSQRAFSFSSQDLARYLCE
VIRDMEHTEDAGTMTTPRRPSGKEHNLSSVRSLSSLSASQGSEVKLHAAQITRMDTFRTL
RAVMCDLRGDSKTXDSQRDKLKESRGQLKCEKNG
NT seq
8745 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggtgttttgctgtgttgccttctaatgccggcagctggatataaaacacag
gctcgattgcctttctttcacggacacatttttgagaactcgccagcggcgtccaaagtg
aacggactcagcattacggtgaagcgcatcgacgcgcaaaaatggtgcccagtctccgga
atgcactttaaattgtttggaaatggcagtgaggatttccacgtcttcgcccaccacaag
cggggaaatgtgctgctgaaaacttcccgggttttagacagagagtcacgctcagaatac
ctcctgagcgtcgggttgtgctgccagacgtgcgcgtcggaatctgccgtcttcgaggtt
gcgttggtgaaagtggacgtgttggacaccaacgaccacgaaccgaccctagtgagcgca
gacagtgttcatataagtttagacgacaccaccgcgctccgtactgttgtttacagactg
gaagctgtcgacgaggacagcgggaagaacgcagagttgacgttcgcctccgtaccaaaa
aatggcagtttctatgttgtcccgaaaacgggggaagttttgctcgtcgactctatcctg
ggtctcctttctcccattacattttatctgtacgtgcgagatcacggctggcctcctttg
accagcaaagctgtgttagttactgtttcaccacagcgatggatgacgcgttccgctgat
ttagtcggtccagagagggcaggacggtcgccgagggcgctcctcgagtccagcaccgtg
ctctccctcaacgtgtctgaggacgccggcatcggctcagtcctaatgagcctaaatccc
accaggtttcagtcagctgcctacgagctcatttacccggagtcagaaagctctccggtc
accgtgggccgcgacagtggagatataacagtaacccggaggctggacagggagacggag
cctttcctggagctcactgttaagattcaagacaaacgaggcccagactggtacctgaac
aaggtgaagctgacgatcactgatgtcaacgacaacrtccctgagtggaatatgaagcca
tacccatacctggctgttgtgtcttccgaggcagtggcaggaacatttgtctaccagcta
caggctattgatggggatgagggcagaagtggagaagtggaatacttcttgtcagatggt
ggcgatggctgctttgccgtggacaagaagacaggccaggttttgaccacggggctcata
ctacagggggagagagagtacctcttaagcgtggtggctcttgatggtctgggaagccgc
agcgcacctgccatgttatctgtagtagcagggtccagagcgccgcagtttaccaacacc
agctacgccatttccataccagagaacaccccggaaggacagcccttccttgtggtgtta
gccatttccttccagaaggaacaaatcagctacagcctgcttatcaatcccagcagcctt
ttcagcattcagcaggacaccggagagatcagcctgaccaggacgctggattatgaaagt
gaccagagacgctaccttctgatggtgcgagccagcgaggagcctggcagcctgagtgct
gcaacagaggttcaggtgttgataacggatgagaacgattgtgtccccgagttcctccag
tccatctacagtgtagatggagtccctgagactgtaaccacagcaacatccttactgcag
gttttagccacagactgtgactcaggattaaatgcagagctcacctattacaccctgagc
ccggatttcagcatttcaccccatgggactgtttttcctgcgaggcggcttgactatgag
aggcctaaccatttgtatgagtttgtggtgatggcagtggacagcggggatgagcctcat
tctggcaccgccacggttcgcgtgaggatggctaatgtcaacgacgaggctcctgaattc
tctcagcctgtatatcgaacatttgtttccgaggacgccggtcccaacactcttgttgcc
acagtcctggccaaagacccagatggtgacagtataacctactccataaccgcaggcaac
gaagagggcaactttgtcattgacagccagaaaggattgatccgtctgcgctccactccc
ctgccaaagcttcaaggcttggagtacgtcctgaacgtgacagccacagatgacaatgca
tcaggcgggccgcactctctcacctccaccgcccgggtcgttgttggagttgatgacgtt
aacaacaacaagccgatatttgagcagtgccagcagtaccgtgagcaggcttcagtgctg
gagaaccagccagsggggacttttgtgttgcaagtgcatgcggtggatgcagatgaggga
gcaaatggaaaagtgaaatatggcttaatgcacagagacagcgccatgcctgccttcaga
atccacccagacacaggagtgattgtgacagcccggcgcttcgacagggagcggcagaga
gagtattcaattacagtaacggccackgattgggccgaggagccgctcattggcatctgt
caacttgccatccagatactggaccagaatgataacagccccaagtttgagaatttrcgc
tacgagtattttctaagagaagacacactggttggtacaagtttcctccgtgtggcagct
cacgacgatgacttcggcactaacgcagccatcacttactccatgtcagtggagcagcct
gagtacttgcgggtcaaccctgtgactggatgggtctacgtcaaccagcccatttctcag
agaacctatataacacgggacattatcgcaacagatggaggaaatcgcaacacttccgtg
gagctggcagtgaccattactaatgtgaagaatcagcctcctcagtgggaaaaagacagc
tacaatgttgtcatacctgagaacactgctagggatacacctatagtgacaatcaaggca
acctctcagctgggtgacccaagagtgacctacaaccttgaggatgggatggtacctgaa
accaacatgccggtccgtttctatctctcccccaaccgggaagatggttctgcatccatt
ttggtgtcagagccgctggactatgagatcactccgtttttttctttgcgggtccgggct
cagaatgtggctgcagtccctctagcagctttcacaagagtatacgtcaacattacagat
gtcaacgacaatgtgccattttttacatcctctatttatgaggcctcggtcacagaagga
gcccagataggcacgtcagttctccacgtgtctgcccatgacaaagacctgggtcttaac
ggagagatcacttactctttgctcagcgacagcagtggtgaccacaacttcttccrcatc
gacccccaaaatggaatcatctacacagaagctgtgtttgaccgggaggcccgcagctcc
tacctgctggaggttcagtcagaagacggccaagaatcagcacgacctggcaaaaacaaa
cagccaaacacagacacagcatatgtgagggttttcatcagcgatgtcaaygacaacaag
cccgtctttgctcagcgactgtatgaagtcgctgtcgatgagaatgcagatgttggtctg
actgttgtcaccgtcagcgccactgatgaggatgaaggagccaacgccaagctccgctac
caaataacatctggcaacaaagggggtgcttttgacatcgagccggaggtcgggacaata
tttattgcacagtcgttggactatgaaaagcaaaagcgatacaagctgttggtcctcgcc
tctgatgggaagtgggaagattatgctgctgttgtagtcaccatagtcaataaaaacgat
gaagcacctgygttttctatgaatgagtactatggawctgtcaccgaagagctcgatggg
tctcctgtttttgtgttacaggttacagccactgacccagacaaagacgcagaccagggc
gccatccggtactccattcatggccaaggtgctgartcgcatttcatgattaacgacatc
acaggggagatgtacgcccagcgaaccgtggaccgagaggagcgggctgtgtggcgcttt
gttgtcatggcaacagacgaagaaggcgagggccttactggcttcacagatgttattatc
aacgtgtgggacatcaacgacaatgccccaacctttgtgtgcgcacctgataattgccat
agcagcgtggctgaaaactctcctcctggaacgtttgtggttgaaatgacagccgtggat
ctggacgacgcagccgtgggtcaaaacgccatcctcacctaccggattacagataatgca
cagaattcggacaatgcgaacctgttcaccattgattccagcactggaaccatatccgtg
gcagcagaaggcctggacagagagcttgctgatagccaccatttggttgtggaggccagg
gacggcggcggaatgacaggcacggccacagtcactgtggtggtgacagacgttaatgat
catgtgccaaaatttagtgaggactggtgtggcgctcgtgtacccgagagcayactggag
gactcgtccctcctggagctgagtgctgtggaccctgatgttggtcactacggccagttg
gcattcagtgtggttgccggagatgcagagcagcgattctatattgtcagtcacaaactg
gagcagaaaagcactctgaggctcaaaaagaagctggactttgagcatccagatgaacaa
aggtttaacctcaccatcaaagtggaggactccaattttgccagttttatccactgtatg
atcctagtagaagatgaaaatgataatgcacctgtgtttagcccgagttctcacctgctc
tcccctgtgcctgaagacgtaccagtaggcaccagtataattcaagtcgtagccactgac
tctgactctggtctgaacggggatgttttctacagcattctcccccattcagacccgtac
ggacactttacagtcaaccgaggtggtgttgtcactgtcaccaagtctctggatagggag
atggtggcaggttatgagttggttgtcatagcgacagaccgtggcacaccagcgctgact
ggcagtgttacggtccacttgccgttgctcgacatgaatgataacggaccagagctggag
atgctctactcccccgtgctgtgggagaatgggcccgcgcctcaagtggtccatcttaac
gggagctcaaccctccttcatgttgtggataaagacaccccacaacacgggccgcctttc
ctcatctccctgccctcggcttactctgctgacttccacctgcaggaccatggggacggc
tctgccacactcaccaccctgcggagattcgacagggaaaggcagagcgaataccactta
ccggtcgtaatgattgacagtggacttccaccgataacggccacaagcactctcaccatc
actattggtgatcataatgataacgcccatcaggcaggggagaaagatgtctatgtgcat
agccgcaagggaaggatgggaaatgcagctctagggaaggtgtatgccccagatccagat
gactgggacaacaagacctacagtctggagacaagtgcagctaaatacttcagtgtgaat
cagagctcagggatgctgactgtccggcaaaacactccgccgggcagctactggttaaga
gttggggtttctgatggggtgtggcctgacgtgatatcaggagtcagggttcacatcagg
gagctggaggaaaaggccattctgtcgtccgcctcactgcgtttgacaggcattacagcg
agagaatttattgactcaaacgtcgaggggaaaagtcggctggaggcgttctgggacttc
ctgtctgaaaccctgtctgtcagaccgggaactatcaacattttcagtgtagcagacaga
gaggcgagaacagtggacatccatttctatgtgctaaccgataatggctacttgcgccca
gagaaactgcacagtgtcctggctgcacataaaaagaagctgcagtcactcctgcgtgtg
aatgtaagccaggtgcaggtagatgagtgtgtgcgcactgactgtaagaagaccggcggc
tgctacacacagttaaccgtcagtgactcacccgccttgatagacttcggtgctttatcc
ctggcctcagtgaaagtgacatcttcggccgtgtgtggctgtgccgcaagagaaatgacc
caccggatgtgctcctactaccccgctaacccctgcctcaatggagggacatgtgttgac
acacaaaatgggtacaggtgccactgccccccacagctcgaagggccagactgtcagcag
acaagacttagtttccttggtaacggctatgcctggtttcctcccataaggccatgcttt
gatagccatctttcgctcgagtttatgacggaggaagatgacgggctgctgttgtacgca
ggcccgttggccacccttttacctggggataatgaagactacattgccattgagctgatt
ggtgggactcctagccttaaaatcaaccatggctctgggaccctagttctccagttaaca
aatgttggagtgagtgacagacgttggcaccgccttgatgtgaggagcaacagcaaagaa
gtgcgctttactctggatcgatgctccagtgcgattgtcatggaagcagagggggtggat
tcttgggcgatgacagaggatcgctcttcctgtgaaatacgaggggtcacgcccaacagg
gataagtacctgaatgtaagccatgttctgcagcttggaggaatcaatgagaacatatca
tatgaatacccacaactacaacacaaacactataccggatgtatacgggacttgattgtg
gacagcaagctgcatgaccttggttctcctgccgaatcctccaacactttgcccggctgc
ggtctcattgataaccactgcgccgacttggagcagcttccctcctgtggcaagcggggc
agctgtcacggggagtggggctctttcagctgcctgtgtgaaaaagggtttacaggcccg
cattgtgatcaagtgactccagagttttcctttgacggccggagccacgttcagctgcag
ctcttgtggtctctccctgcaaggcggaccagagtccaggttggggtccgtactcgcgct
ttaacaggggtcatcctcagcttgctgtcccaggagcaaagtgaatacctgcgtttagag
gtgattcaaggcctgctggctgttttctacaacctgggagacggagactacaatatctca
ctgccttaccaccgcctggatgacggggaatggcatgaggtggagttggatcggttcggc
agagagttcaccctgaggctggatcggggcgggggtcgacttgaaatcaccgcctcaccc
ggccagagtcaggagatcattattgatccctctgtggtgatgcttgggaactctttccca
tcaggacacaaccgcagcttctttggctgtttgcgtgatgtgaggtttaacggccgctcc
gttcccctggatcaggaccagcattcagaaggacttcaggtgctggtcgcttcacagggc
gtctctgtcggctgctcctcagatgcctgcagaaagcaccactgctcccctcccttggtc
tgcttggacctctggagacagcatgattgcaggtgccctccgggacacatgaccagagag
acctcctcgggcagagcgtgcatctacacgctctgcgccagccggccgtgtcgacacgga
acgtgcgtggcccactcgccgtcgcgctactcatgccactgcagcgagggctaccgaggg
cggcactgcgaggtggcgctcgccgtgctccacagcgaggacggcagcagcctcagcctc
agctccatgtttgccatcagcatctgtgtcatggcctttctagtgttgatgctggggctg
tttctttactcttgctggaggagacacaagggcctgaaggagggtgtttaccatgtgtct
gcacaccacggcgagtgggaggatatccgagaaaacgtgctcaactacgacgaggaaggt
ggcggggaacaggaccagaacgccttcaacatggtggagctgcagcgctccctccagccc
agccccgcacaatccctccgctacagctacccacaaaacaccagctcctacccacagact
aagcttcctcaagacaacaacaagaaggggatgtcgaatggaaatggcaacgctgctatt
gccctgcgcctggccatccccccgtcggaggcagaaaccttgtcgtcccctctgaccttc
cgccgctctcagagagccttctccttctccagccaagatttggcccgctacctgtgtgag
gtcatcagagacatggagcacacagaggacgccggcaccatgaccacgccgcgccgtccc
tccggaaaggagcacaacctgtcctcggtgcgctccctcagctccctcagcgcgtcccag
ggttcggaagtgaagcttcacgccgcccagataacccggatggacacttttagaaccctt
cgagccgtgatgtgcgacctgaggggagactccaagactrcggacagtcagagggacaaa
cttaaggagagcagagggcagctkaagtgtgagaagaatgggtga
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integrated database retrieval system
