KEGG   Poecilia reticulata (guppy): 103466312
Entry
103466312         CDS       T05149                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04510  Focal adhesion
pret04512  ECM-receptor interaction
pret04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103466312 (lamb4)
   04518 Integrin signaling
    103466312 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103466312 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMB1 LAMB4 LAMININ_IV_B ATG17_like DUF7630 F5_F8_type_C
Other DBs
NCBI-GeneID: 103466312
NCBI-ProteinID: XP_008410030
LinkDB
Position
6:12551893..12576691
AA seq 1783 aa
MILIFVFVCLSAVKPQDLQDQCPGGSCHPQLGDLMVGRGAQLSASSTCGVDGPQNYCIVG
YLEGEKKCFTCDSRLPFSPQGNPQSHRIENVITTFDSDRRLKWWQSENGVHQVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGQSWKVFRYFADDCSLHFPSVPAEPASFIDDV
VCDSRYSGPEPSSGGEVVLKALDPVFEIDDPYAPNIQELITLTNIRVNFTRLFTLGDTLL
ARRRRNPQEKYYYSLHSMVVQGSCFCNGHAKRCVPVDGGRGDVFTQPGMVHGRCVCEHNT
AGENCERCQPFHNDSPWKPGGETTPNICRRCNCHGHSDSCHFDAARYEETGGASGGVCDD
CRHDRTGPQCERCRPLMYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCFCKENV
EGQRCDRCKHDFFDLRSDNPAGCEVCRCHGLGSVGPCDPLTGSCRCEPMATGPLCDHCVA
GFWGLGNSVFKCSPCDCDVGGASSNMCSPEDGQCSCLPNMVGRRCSDPAPGYFLPSLIYF
LYEAELAAQLTGGTSSPSPPAPLPAFPSSSPLVNPGLLPPCEQYFRSQGYDFQLSDGKVI
LIRRPRHLARQRRQQNTSPPNRGPLQILPHQGSPEQSGTGLGLVRVTEGAGLRFTVDNLP
TSMEYQLVIRYESESVSDWVARVNVIMLSPGDGGCSNDPPTGSLTLNLPRSSRLGILDSR
VCLNARGRYSVVIFFDRQQRSDNAPLLVDSMGLVQSFYSVQEDFCSQSDFDSFSHSHCVG
LDVYLGSQESLPKICEGLIKSLSARIHNGAVACRCNVNGSLGSGCSTLGGSCECKPSVIG
RCCDACAPLTFGFGPEGCKRCECNPQGSLSEACDPSGGQCACRPRVSGRRCDRCESGFSG
LPLCQPCDCNGLSETCDGRTGECVDCREHSSGPHCDRCVEGYYGNPVSRQPCQPCLCPDI
LSSGRFFASSCRYDPQSVSVSCSCREGHAGERCDRCSPGFYGDLRLPGAACKACSCNNNI
DPDDSDACDGTTGECLRCLHYTTGPQCQFCKPGYYGNALQHNCKECSCDRRGTKATLCPL
ESPCFCDRTTGQCPCRTGVVGDLCDECEDGFWNLDGASGCQPCSCNPANSVSNVCDKVSG
QCPCRPEFGGTQCDECGENHFGNPDLQCFSCDCNLEGTQRPSCDPETGECICRTGVNGIL
CDECAPGYSSEFPACEKCHECMVLWTENVTDVQRAAQRMRTFIPLHGDTQHPPHSQYWQR
MLEMHSRLDSVGNMTGFSLPKLEKVEKLYMKIRKLKDAVDTNIILIDPSVLLNNEISNIN
VEFQKMLKNLKDKLTKDPNKKETQPVEEMLQEIQKLHKTFMSDEKRVRNSIKAVENSMDT
RQETKRKLSMCSGGGDLATLGKKVKELNMRQLNQKICGRPDPEDCSGCPEGQICDGAVPD
AQKASEMAEKVKEQLIKFPSNLDESKKKISDVQQVAQDAKDQAQDLQRQISATTESMERE
KNKTRELLQRVKQYLMDEMVPPGDIEKMANAVLRIQLPRSPAEIQSMINEISNLLNGATK
FQGDLKKLQDEAKTAQELLQKATEAKEKTKNIDVKDILSDIIAADAAQSKANDNLEVANK
DRDGAKDRIQEAGNKLNRIEDKLMNQPVGLLEEIEALKNKTEQNREMAKEARETAESALT
NVSNDAELQEVQEQFELLKQKHLNKTLEDEAADRLQEILKETEDMQRQMEDRLQQIEDVE
QKIQLLIQRKEEKIVEVVELLQTVESLQKEIASKAEYYTTCSS
NT seq 5352 nt   +upstreamnt  +downstreamnt
atgatcctcatctttgtttttgtctgtctctcggcggtaaaaccccaagacctccaggac
cagtgccctggcggctcctgtcacccccagcttggtgacctgatggtgggacggggagcg
cagctctcagcctcgtccacctgcggcgtggacggaccccagaactactgcatcgttgga
tacctggagggggagaaaaaatgtttcacgtgtgactcccggctgccgtttagtccccaa
ggcaacccacagagccatcgtatcgagaacgtcatcacaacgttcgactccgacagacga
ctgaagtggtggcagtctgagaacggagttcatcaagtcagcatccagttggacctggag
actgtcttccagttcagccacctggtcctcaccttcaagagcttcaggcctgcagccatg
ctggtggagcgttcgaaggattttggacagagctggaaagtttttcgctactttgcagac
gattgttcccttcattttccttcagttcctgctgaacctgccagcttcattgacgacgtt
gtctgtgacagcagatactctggaccagaaccgtcctcaggtggagaggtggtgctaaaa
gctctggatcctgtctttgaaatagatgacccatatgctccaaacattcaagagctcatc
accttgacgaatatccgcgtgaacttcacccgcctcttcacacttggtgacacgctgctg
gctcgcagacgcagaaatcctcaggagaaatattattactcgcttcacagcatggtggtt
cagggaagctgcttctgtaacggacatgccaagcgctgtgtccctgtggacggaggacgt
ggggacgtcttcacccagcccggcatggttcacggtcgatgtgtctgtgagcacaacaca
gctggggagaactgtgagagatgtcagccgttccacaatgactccccctggaagcctgga
ggagaaactacacccaacatctgcaggaggtgtaactgtcacggtcactcagactcatgt
cactttgatgctgctcgctacgaagagaccggaggtgcgagtggcggcgtgtgtgacgac
tgccgccatgacaggacggggcctcagtgcgagcgctgtcgacctttaatgtatcaggac
ccgcagagggcgctggaggacccccacgcctgcataccgtgtgactgcgaccccgccggc
tcccacagcggcggcttgtgtgatgcttcaagcggtcggtgtttctgtaaggaaaacgtg
gagggtcaacgctgcgatcgctgcaaacatgacttcttcgatttgagatcggacaacccg
gctgggtgtgaagtctgcaggtgtcacggtttgggaagtgttggaccatgtgatccactt
acagggagctgtagatgtgagccaatggccaccgggccactgtgtgatcattgtgtggca
ggtttctggggtttgggaaactccgtgttcaaatgttcaccctgtgactgtgatgttggc
ggagccagcagcaacatgtgttctccagaggacggacagtgttcctgtttacccaacatg
gtgggccggcgctgctctgatcctgcacctggttacttcctgccttcgctcatctacttc
ctgtatgaggcggagctcgctgcacagctgacaggagggacttcctccccttctcctcct
gctcctcttcctgcctttccctcttcctctccactggtgaatcccggccttttgcctcca
tgtgagcagtatttcagaagtcagggctatgacttccagctctccgatggaaaagtgatt
ttgatccggaggcctcgtcatctcgcccgtcagaggagacagcagaacaccagccctccg
aaccgggggcccctgcagatccttccccaccagggctcacctgagcagtcaggaactggt
ctgggattggtcagagtgacagagggggcggggcttagattcactgtggacaacctgcca
acatcaatggagtaccagctggtgatccgctatgaatctgagtctgtctccgattgggtg
gcgagagtgaacgtcatcatgctgtcaccgggcgacggaggctgcagtaacgaccctcca
acaggaagtctgacactgaacctccccagaagctccagattaggtattctggattcccgg
gtgtgtctgaacgccagaggtcgatactctgtggtgattttctttgacaggcagcagaga
tcagacaacgctcctctgctggtcgactcgatgggactggttcagagtttctattcagtc
caagaagacttctgctcccagagtgacttcgactcttttagtcactctcactgcgtcgga
ttggacgtgtatctcggttctcaggagtcacttccaaaaatctgcgaaggactgatcaag
agtctgtcagcgcgcatccacaacggagctgtggcctgcaggtgtaacgtcaacggttct
cttggatcggggtgcagtacgctgggcgggtcgtgtgaatgtaagcccagcgtgatcgga
cgttgctgtgacgcttgcgcacctctgacctttggttttggacctgaaggctgtaaacga
tgcgagtgcaaccctcaaggctctctgtcggaggcatgcgatccgagcggaggtcagtgt
gcgtgtcgcccccgggtatcgggtcgacgctgcgatcgatgcgagtctggattctcgggg
ctcccgctgtgtcagccctgtgactgcaacggcctgtcggaaacctgcgatgggcggacc
ggagagtgtgtggactgcagggaacacagcagcgggccgcactgtgacagatgtgtggag
ggttactatggtaacccggtctccaggcaaccctgtcagccctgcctgtgccccgatatc
ctgagcagcggacggttctttgcctcttcctgtcgatacgacccgcagtctgtcagtgtg
agctgctcctgcagggagggacacgcaggtgaacgatgtgacaggtgcagtccgggtttc
tacggcgacttgagattgccaggtgctgcctgcaaggcgtgctcctgcaacaacaacatc
gacccggacgacagcgacgcctgcgacggcacaactggagaatgtctccgctgccttcac
tacacaacgggtccgcagtgccagttctgcaagcctggttactatggcaacgccctgcaa
cataactgtaaagaatgctcctgtgaccgccgggggaccaaggcgactctatgtcccctg
gagagcccctgcttctgcgacaggacgacaggacagtgtccctgcaggacgggggtggtg
ggagatctctgtgatgaatgcgaggatgggttctggaacctggacggagcgtcggggtgt
cagccctgcagctgcaacccggctaactccgtctctaacgtctgtgacaaggtgtcggga
cagtgtccctgtcgtcctgagtttggaggaacacagtgtgacgaatgtggagaaaaccat
tttgggaatccagacctgcagtgcttctcttgtgactgtaaccttgagggaacgcagcgc
ccgtcgtgtgaccctgaaaccggtgagtgcatctgtcggactggcgtcaacgggatcctc
tgtgacgagtgcgctccaggctacagctcagagtttcctgcctgcgagaaatgccatgaa
tgcatggttctgtggaccgaaaacgtcactgacgtccagcgagccgcccaaaggatgagg
accttcatccctctccacggcgacacccagcatccccctcacagtcagtactggcagcgg
atgctggagatgcactccagactggacagcgttggtaacatgactggtttctctctgcca
aagctggagaaggtagagaaactctacatgaagattaggaagctgaaagatgctgttgac
accaacataattctgatcgacccatctgtcctccttaacaatgaaatcagtaacattaac
gtggagtttcagaagatgctgaaaaacctgaaggataaactcaccaaggatccaaacaag
aaagaaactcagccagtggaagagatgctgcaggagatccagaagcttcacaaaaccttc
atgtcagatgaaaagcgggtgagaaactccattaaagctgtggagaactccatggacacc
agacaggagactaagcgcaaactgagcatgtgcagcggaggaggagacctggcaactctg
gggaagaaggtcaaggagcttaacatgcgccaactcaaccaaaagatctgcgggcgaccg
gatccggaggactgctctggatgtcctgaaggtcagatctgcgacggagctgttcccgat
gcccagaaagcctctgagatggccgagaaagtaaaagagcaactcatcaaattcccatcc
aatctggacgagtcgaagaaaaagatcagtgatgtccagcaagtggctcaggacgccaaa
gaccaggcccaagacctgcagcgccaaatcagtgccaccaccgaatcaatggagagagag
aaaaacaaaaccagagagctgctccagagagtcaaacagtatctgatggatgaaatggtt
cctccaggtgacattgagaaaatggccaacgctgtcctgaggatccagctgccgcgatca
cctgctgagatccaatcgatgatcaatgagatcagtaatcttttgaacggtgccaccaaa
ttccagggggacctgaagaagctgcaggatgaagccaaaacagctcaggagcttttgcag
aaagcgacagaagccaaggagaagactaaaaacatcgacgttaaagacatcctcagtgac
attattgctgcagacgcagctcagagcaaagccaacgacaacctggaggttgcaaataag
gacagagacggcgccaaagaccgaatccaagaggcgggaaacaaactgaaccgcatcgag
gataagctgatgaaccagcctgtaggtctgctggaggagattgaagctctaaaaaataaa
acggagcagaacagagagatggccaaagaggccagagaaactgctgagtcagcgttgacc
aacgtttctaatgacgcggagctgcaagaagttcaggagcagtttgagctcttaaagcag
aaacacttgaataaaacacttgaagacgaagccgcagatcgactgcaggaaatcctgaag
gagaccgaagacatgcagagacaaatggaggatagactccaacagatagaagacgtggag
cagaagatccagctgctgatccagaggaaggaggagaaaatagtggaggtggtcgagctg
ctgcagacggtggagtcacttcaaaaggaaatcgcctctaaagctgaatattacaccaca
tgttcctcataa

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