Poecilia reticulata (guppy): 103466312
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Entry
103466312 CDS
T05149
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103466312 (lamb4)
04518 Integrin signaling
103466312 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103466312 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMB4
LAMININ_IV_B
ATG17_like
DUF7630
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
103466312
NCBI-ProteinID:
XP_008410030
LinkDB
All DBs
Position
6:12551893..12576691
Genome browser
AA seq
1783 aa
AA seq
DB search
MILIFVFVCLSAVKPQDLQDQCPGGSCHPQLGDLMVGRGAQLSASSTCGVDGPQNYCIVG
YLEGEKKCFTCDSRLPFSPQGNPQSHRIENVITTFDSDRRLKWWQSENGVHQVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGQSWKVFRYFADDCSLHFPSVPAEPASFIDDV
VCDSRYSGPEPSSGGEVVLKALDPVFEIDDPYAPNIQELITLTNIRVNFTRLFTLGDTLL
ARRRRNPQEKYYYSLHSMVVQGSCFCNGHAKRCVPVDGGRGDVFTQPGMVHGRCVCEHNT
AGENCERCQPFHNDSPWKPGGETTPNICRRCNCHGHSDSCHFDAARYEETGGASGGVCDD
CRHDRTGPQCERCRPLMYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCFCKENV
EGQRCDRCKHDFFDLRSDNPAGCEVCRCHGLGSVGPCDPLTGSCRCEPMATGPLCDHCVA
GFWGLGNSVFKCSPCDCDVGGASSNMCSPEDGQCSCLPNMVGRRCSDPAPGYFLPSLIYF
LYEAELAAQLTGGTSSPSPPAPLPAFPSSSPLVNPGLLPPCEQYFRSQGYDFQLSDGKVI
LIRRPRHLARQRRQQNTSPPNRGPLQILPHQGSPEQSGTGLGLVRVTEGAGLRFTVDNLP
TSMEYQLVIRYESESVSDWVARVNVIMLSPGDGGCSNDPPTGSLTLNLPRSSRLGILDSR
VCLNARGRYSVVIFFDRQQRSDNAPLLVDSMGLVQSFYSVQEDFCSQSDFDSFSHSHCVG
LDVYLGSQESLPKICEGLIKSLSARIHNGAVACRCNVNGSLGSGCSTLGGSCECKPSVIG
RCCDACAPLTFGFGPEGCKRCECNPQGSLSEACDPSGGQCACRPRVSGRRCDRCESGFSG
LPLCQPCDCNGLSETCDGRTGECVDCREHSSGPHCDRCVEGYYGNPVSRQPCQPCLCPDI
LSSGRFFASSCRYDPQSVSVSCSCREGHAGERCDRCSPGFYGDLRLPGAACKACSCNNNI
DPDDSDACDGTTGECLRCLHYTTGPQCQFCKPGYYGNALQHNCKECSCDRRGTKATLCPL
ESPCFCDRTTGQCPCRTGVVGDLCDECEDGFWNLDGASGCQPCSCNPANSVSNVCDKVSG
QCPCRPEFGGTQCDECGENHFGNPDLQCFSCDCNLEGTQRPSCDPETGECICRTGVNGIL
CDECAPGYSSEFPACEKCHECMVLWTENVTDVQRAAQRMRTFIPLHGDTQHPPHSQYWQR
MLEMHSRLDSVGNMTGFSLPKLEKVEKLYMKIRKLKDAVDTNIILIDPSVLLNNEISNIN
VEFQKMLKNLKDKLTKDPNKKETQPVEEMLQEIQKLHKTFMSDEKRVRNSIKAVENSMDT
RQETKRKLSMCSGGGDLATLGKKVKELNMRQLNQKICGRPDPEDCSGCPEGQICDGAVPD
AQKASEMAEKVKEQLIKFPSNLDESKKKISDVQQVAQDAKDQAQDLQRQISATTESMERE
KNKTRELLQRVKQYLMDEMVPPGDIEKMANAVLRIQLPRSPAEIQSMINEISNLLNGATK
FQGDLKKLQDEAKTAQELLQKATEAKEKTKNIDVKDILSDIIAADAAQSKANDNLEVANK
DRDGAKDRIQEAGNKLNRIEDKLMNQPVGLLEEIEALKNKTEQNREMAKEARETAESALT
NVSNDAELQEVQEQFELLKQKHLNKTLEDEAADRLQEILKETEDMQRQMEDRLQQIEDVE
QKIQLLIQRKEEKIVEVVELLQTVESLQKEIASKAEYYTTCSS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcatctttgtttttgtctgtctctcggcggtaaaaccccaagacctccaggac
cagtgccctggcggctcctgtcacccccagcttggtgacctgatggtgggacggggagcg
cagctctcagcctcgtccacctgcggcgtggacggaccccagaactactgcatcgttgga
tacctggagggggagaaaaaatgtttcacgtgtgactcccggctgccgtttagtccccaa
ggcaacccacagagccatcgtatcgagaacgtcatcacaacgttcgactccgacagacga
ctgaagtggtggcagtctgagaacggagttcatcaagtcagcatccagttggacctggag
actgtcttccagttcagccacctggtcctcaccttcaagagcttcaggcctgcagccatg
ctggtggagcgttcgaaggattttggacagagctggaaagtttttcgctactttgcagac
gattgttcccttcattttccttcagttcctgctgaacctgccagcttcattgacgacgtt
gtctgtgacagcagatactctggaccagaaccgtcctcaggtggagaggtggtgctaaaa
gctctggatcctgtctttgaaatagatgacccatatgctccaaacattcaagagctcatc
accttgacgaatatccgcgtgaacttcacccgcctcttcacacttggtgacacgctgctg
gctcgcagacgcagaaatcctcaggagaaatattattactcgcttcacagcatggtggtt
cagggaagctgcttctgtaacggacatgccaagcgctgtgtccctgtggacggaggacgt
ggggacgtcttcacccagcccggcatggttcacggtcgatgtgtctgtgagcacaacaca
gctggggagaactgtgagagatgtcagccgttccacaatgactccccctggaagcctgga
ggagaaactacacccaacatctgcaggaggtgtaactgtcacggtcactcagactcatgt
cactttgatgctgctcgctacgaagagaccggaggtgcgagtggcggcgtgtgtgacgac
tgccgccatgacaggacggggcctcagtgcgagcgctgtcgacctttaatgtatcaggac
ccgcagagggcgctggaggacccccacgcctgcataccgtgtgactgcgaccccgccggc
tcccacagcggcggcttgtgtgatgcttcaagcggtcggtgtttctgtaaggaaaacgtg
gagggtcaacgctgcgatcgctgcaaacatgacttcttcgatttgagatcggacaacccg
gctgggtgtgaagtctgcaggtgtcacggtttgggaagtgttggaccatgtgatccactt
acagggagctgtagatgtgagccaatggccaccgggccactgtgtgatcattgtgtggca
ggtttctggggtttgggaaactccgtgttcaaatgttcaccctgtgactgtgatgttggc
ggagccagcagcaacatgtgttctccagaggacggacagtgttcctgtttacccaacatg
gtgggccggcgctgctctgatcctgcacctggttacttcctgccttcgctcatctacttc
ctgtatgaggcggagctcgctgcacagctgacaggagggacttcctccccttctcctcct
gctcctcttcctgcctttccctcttcctctccactggtgaatcccggccttttgcctcca
tgtgagcagtatttcagaagtcagggctatgacttccagctctccgatggaaaagtgatt
ttgatccggaggcctcgtcatctcgcccgtcagaggagacagcagaacaccagccctccg
aaccgggggcccctgcagatccttccccaccagggctcacctgagcagtcaggaactggt
ctgggattggtcagagtgacagagggggcggggcttagattcactgtggacaacctgcca
acatcaatggagtaccagctggtgatccgctatgaatctgagtctgtctccgattgggtg
gcgagagtgaacgtcatcatgctgtcaccgggcgacggaggctgcagtaacgaccctcca
acaggaagtctgacactgaacctccccagaagctccagattaggtattctggattcccgg
gtgtgtctgaacgccagaggtcgatactctgtggtgattttctttgacaggcagcagaga
tcagacaacgctcctctgctggtcgactcgatgggactggttcagagtttctattcagtc
caagaagacttctgctcccagagtgacttcgactcttttagtcactctcactgcgtcgga
ttggacgtgtatctcggttctcaggagtcacttccaaaaatctgcgaaggactgatcaag
agtctgtcagcgcgcatccacaacggagctgtggcctgcaggtgtaacgtcaacggttct
cttggatcggggtgcagtacgctgggcgggtcgtgtgaatgtaagcccagcgtgatcgga
cgttgctgtgacgcttgcgcacctctgacctttggttttggacctgaaggctgtaaacga
tgcgagtgcaaccctcaaggctctctgtcggaggcatgcgatccgagcggaggtcagtgt
gcgtgtcgcccccgggtatcgggtcgacgctgcgatcgatgcgagtctggattctcgggg
ctcccgctgtgtcagccctgtgactgcaacggcctgtcggaaacctgcgatgggcggacc
ggagagtgtgtggactgcagggaacacagcagcgggccgcactgtgacagatgtgtggag
ggttactatggtaacccggtctccaggcaaccctgtcagccctgcctgtgccccgatatc
ctgagcagcggacggttctttgcctcttcctgtcgatacgacccgcagtctgtcagtgtg
agctgctcctgcagggagggacacgcaggtgaacgatgtgacaggtgcagtccgggtttc
tacggcgacttgagattgccaggtgctgcctgcaaggcgtgctcctgcaacaacaacatc
gacccggacgacagcgacgcctgcgacggcacaactggagaatgtctccgctgccttcac
tacacaacgggtccgcagtgccagttctgcaagcctggttactatggcaacgccctgcaa
cataactgtaaagaatgctcctgtgaccgccgggggaccaaggcgactctatgtcccctg
gagagcccctgcttctgcgacaggacgacaggacagtgtccctgcaggacgggggtggtg
ggagatctctgtgatgaatgcgaggatgggttctggaacctggacggagcgtcggggtgt
cagccctgcagctgcaacccggctaactccgtctctaacgtctgtgacaaggtgtcggga
cagtgtccctgtcgtcctgagtttggaggaacacagtgtgacgaatgtggagaaaaccat
tttgggaatccagacctgcagtgcttctcttgtgactgtaaccttgagggaacgcagcgc
ccgtcgtgtgaccctgaaaccggtgagtgcatctgtcggactggcgtcaacgggatcctc
tgtgacgagtgcgctccaggctacagctcagagtttcctgcctgcgagaaatgccatgaa
tgcatggttctgtggaccgaaaacgtcactgacgtccagcgagccgcccaaaggatgagg
accttcatccctctccacggcgacacccagcatccccctcacagtcagtactggcagcgg
atgctggagatgcactccagactggacagcgttggtaacatgactggtttctctctgcca
aagctggagaaggtagagaaactctacatgaagattaggaagctgaaagatgctgttgac
accaacataattctgatcgacccatctgtcctccttaacaatgaaatcagtaacattaac
gtggagtttcagaagatgctgaaaaacctgaaggataaactcaccaaggatccaaacaag
aaagaaactcagccagtggaagagatgctgcaggagatccagaagcttcacaaaaccttc
atgtcagatgaaaagcgggtgagaaactccattaaagctgtggagaactccatggacacc
agacaggagactaagcgcaaactgagcatgtgcagcggaggaggagacctggcaactctg
gggaagaaggtcaaggagcttaacatgcgccaactcaaccaaaagatctgcgggcgaccg
gatccggaggactgctctggatgtcctgaaggtcagatctgcgacggagctgttcccgat
gcccagaaagcctctgagatggccgagaaagtaaaagagcaactcatcaaattcccatcc
aatctggacgagtcgaagaaaaagatcagtgatgtccagcaagtggctcaggacgccaaa
gaccaggcccaagacctgcagcgccaaatcagtgccaccaccgaatcaatggagagagag
aaaaacaaaaccagagagctgctccagagagtcaaacagtatctgatggatgaaatggtt
cctccaggtgacattgagaaaatggccaacgctgtcctgaggatccagctgccgcgatca
cctgctgagatccaatcgatgatcaatgagatcagtaatcttttgaacggtgccaccaaa
ttccagggggacctgaagaagctgcaggatgaagccaaaacagctcaggagcttttgcag
aaagcgacagaagccaaggagaagactaaaaacatcgacgttaaagacatcctcagtgac
attattgctgcagacgcagctcagagcaaagccaacgacaacctggaggttgcaaataag
gacagagacggcgccaaagaccgaatccaagaggcgggaaacaaactgaaccgcatcgag
gataagctgatgaaccagcctgtaggtctgctggaggagattgaagctctaaaaaataaa
acggagcagaacagagagatggccaaagaggccagagaaactgctgagtcagcgttgacc
aacgtttctaatgacgcggagctgcaagaagttcaggagcagtttgagctcttaaagcag
aaacacttgaataaaacacttgaagacgaagccgcagatcgactgcaggaaatcctgaag
gagaccgaagacatgcagagacaaatggaggatagactccaacagatagaagacgtggag
cagaagatccagctgctgatccagaggaaggaggagaaaatagtggaggtggtcgagctg
ctgcagacggtggagtcacttcaaaaggaaatcgcctctaaagctgaatattacaccaca
tgttcctcataa
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integrated database retrieval system