Poecilia reticulata (guppy): 103466316
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Entry
103466316 CDS
T05149
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103466316 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103466316 (nup160)
03036 Chromosome and associated proteins [BR:
pret03036
]
103466316 (nup160)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103466316 (nup160)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103466316 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Nucleoporin_N
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
103466316
NCBI-ProteinID:
XP_008410037
UniProt:
A0A3P9N701
LinkDB
All DBs
Position
LG6:complement(21264770..21279932)
Genome browser
AA seq
1398 aa
AA seq
DB search
MAAVLERSLVEICGFGREAERRFREVTVNPGVSAPPGGLKFADSAGAFHYNESGKLLSVT
SNRFIHWFTSGDTVQLVEESLDTNLLNNGVRLKFTCCSVLPGGVTVHETLNNIIILICTN
QTVHRLVLPHPARMYRSELVTERHMQSVFTDVMKLDLQDPAHCAVIPGWAGHTAIPGAVT
AWLSFPGDAHFALAAPTGGITVVTLPPHNSQGGVSVVELKRSSMMRRISGWMPTAIRGEQ
SPADLVLSLAVREEEDDSLIFALCQDHRLRMWSLTEQTCLLEADMLEYMPACKGVRRLSG
QGHSLRLAFSSRTGLCLCVHLAVPQRGQFIVLQLVAIDNNRYSLEHISSLFSTQETLVDF
TLTPTDVWALWLDESNSAAVKYINFEHNTAGQWNQVFVQPPPEEEVLIGVDLDPRETYLE
HLFSPLRFTATAIVRALQIFRRGSDKVLDPSWENLKKEVTQAVESELQSSVTEFEFSQEE
YRQLQVEFWSRFYSCCLQYQEVESTPLGLTVSHHTGMACLLRKGFVSFLLPCFAVDHLYL
SLDPYLLSEEDTPISDDPDAARDILQLVRTLRLVSDTVSAEMAYEMEKALEYLQTPEKAA
ELVLENMVCNDKDGVIEDIQNKLQDIRSPIAAMVALLRELDLETDSELGGDGPVAPGLNV
RMSLSQLYGSSCSISVVCQGVCHMAMTRAQFCRDLLILQKLYLHFGDNVFLGGGNQLLQL
QQDLIPRTSHLLSSYHLLKHISQSLASSVPMDTIDVNLQHLTALELSDTPSLSTGRSVLN
PQTVLELFYQTAARRIIISQIFSQQHPDSPLLWTHMISTVVQLLAQLLWPSNPGFQFPEC
LMANCQFTQLQEYVRLVGPWCQVNIGSCRFMLAQCHLANGEGQKALRCFQEAATEVEREE
FLMKLTGSEDEEAAAATSPRLQYYNKVLRLLEDVGLPELVIQLASLAIAEADDDVHCQAA
LWTRIFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVLCERSQLQDLVQFPYMNLH
DEVVGIIESRARGLDLLTHNYYELLYAFHITRHNYRKAGTVMFEFGMRLGREVRTRLGLQ
KQVNCYLAALNCLRLIRPEYAWIVQPVSGSTYERPGASPKRNSDGEFPAEPAAGRRQVDI
LELHDLEKEYFLSRARLTLAQHHPPSAAIAGTASAPELVLLLVQTGLFDAALSLSRIFKL
NLSPIFDALTFKCIQLQSGGEEPQSEAWSWLAANQLSVVNTKESSATDEAWRLLASYLDR
YPSTNGQHHRHVIHKLLSHGVPLPDWLLQSYKRVDAPSLLRLLLNFDLLETAAELVLEYV
DAVLGRGHQYFGIERPLSAMSPPAWLPYTAIDQLLHALSETQTHSNLHIKVRDKLDEYHN
VVQQTTEHRLASQRRVAA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttttggaacgtagtctcgtggagatctgtgggttcgggcgggaagccgaa
cggcggttccgagaggtcacagtgaatccaggtgtaagcgctcctccgggcgggttaaag
tttgcagacagcgccggagcgttccattacaatgagagcggcaagttgctgtctgtcact
agcaaccgcttcatccactggtttacgtcgggggacacggtgcaactggtggaggagtct
ctggacaccaacctgctgaataatggcgtcagactgaagttcacctgctgcagcgtactg
cctggtggagtcaccgtccacgagaccctaaataacatcatcatcctcatctgcaccaat
cagactgtccacaggctggttcttcctcatccggcgcgcatgtaccgcagtgagctggtc
acagagcgccacatgcaatctgtcttcaccgatgtgatgaagcttgaccttcaggaccca
gcccactgcgccgtaatccccggctgggcggggcacacggcgattcccggcgctgtgacg
gcatggctcagttttcccggagacgctcactttgctctggctgcgcctacgggaggcatc
acagtggtgacgctgccaccgcacaattcgcagggcggcgtgtcggtggtggagctgaag
agaagttccatgatgaggaggatctccggctggatgcccaccgccatccggggcgagcag
agtccggctgacctggttctgagcctggcggtccgggaggaggaggacgattcgctgatc
tttgctctgtgtcaggatcatcggctgcgcatgtggtcgctcacggagcagacatgcctc
ctagaagccgacatgttggagtacatgccggcctgtaaaggcgtgaggcggctgtcgggt
cagggtcacagtctgaggctcgccttctcatccagaaccgggctgtgtctctgcgtgcac
ctggccgtcccgcagagaggacagttcatcgtcctgcagcttgtcgccatagacaacaac
cgctacagcctggaacacatctcttctctgttcagcacgcaggaaactttggtggatttc
accctgaccccgaccgacgtgtgggctctgtggttggacgagtccaactctgccgcggtc
aagtacatcaacttcgaacacaacacagcgggtcagtggaaccaggtgtttgttcagcca
ccaccagaagaagaagtcctaataggagtagacctggaccccagggagacctacctggag
catctcttctctccgctgcgtttcactgcgacggccatcgtcagagccttgcagatcttt
cgtcgtggctctgataaggtcttggatccgtcttgggagaatctgaagaaggaggtgacc
caggctgtcgagagcgagctgcagagcagcgtcacagagttcgagttctctcaggaggag
taccgccagctgcaggtggagttctggtcccggttctactcctgctgtctgcagtaccag
gaggtggagtccactccgcttggtctgacggtcagccaccacaccgggatggcctgtctg
ctgcgtaagggcttcgtctcgttcctgctgccgtgtttcgctgtggatcacctgtacctg
tccctcgatccgtacctgctgtctgaggaggacacgcccatcagcgacgatccagacgcg
gcgcgagacatcctgcagctggtccggactctgcggctcgtcagcgacaccgtttctgca
gagatggcgtacgagatggagaaagctctggagtacctccagactcctgagaaagctgcc
gagctggtcctggaaaacatggtgtgcaacgacaaagatggcgtgatcgaagacatccag
aacaaacttcaggacatccggagtcccatagcagccatggtggctctgctaagggagctg
gacctggagacggactctgagctgggcggagacgggcctgttgctccaggtctgaacgtc
aggatgagcctgtctcagctctacggcagcagctgctccatctccgtcgtctgtcagggt
gtctgccacatggccatgaccagagcgcagttctgcagagacctgctcatactgcagaag
ctctacctgcacttcggagacaacgtgtttctgggtggtggaaaccaattgctgcagctt
cagcaggatcttatcccacggacctcccacctcctttcctcctaccaccttctcaaacac
atcagtcagagcctcgcctcctccgttcccatggacaccatagatgtgaacctgcagcac
ctcacagcgctggagctgtcggacacaccaagcttatcgacgggtcgatcagtgctgaac
cctcagacggtcctggagctcttctaccagactgcggccaggaggatcatcatctcccag
atattttcccagcagcaccccgactctccgctcctctggacccacatgatctccaccgtg
gtccagctgctggctcagctgctctggcccagtaaccctggcttccagttcccagagtgt
ctgatggccaactgtcagtttactcagctgcaggagtacgtgcgtctggttggcccttgg
tgtcaggtgaacatcggctcgtgccgcttcatgctggctcagtgtcacctggccaacgga
gagggccagaaggctctgcggtgcttccaggaggcggcgacagaggtggagagggaggag
tttctaatgaagctgactggcagcgaggacgaggaggcggcggcggcgaccagtccgagg
ctgcagtactacaacaaggtgctgcgactgctggaggacgtgggtcttcccgagctcgtc
atccagctcgcctccctggccatagcagaagcagacgacgacgtccactgtcaggcggcg
ctgtggacgaggatcttcaaacaccatctggatctgggacacaacagcgaagcttacgaa
gctctgacccagaaccccgacagcagcatgcagctggattgtctccgtcagctggtcgtg
gtgctctgcgaacgctcccagctacaggacctggtccagtttccctacatgaacctgcat
gatgaggtggtcggcatcatcgagtctcgtgctcgcggtctagatctgctgacacacaac
tactacgagctgctgtacgccttccacatcacccgacacaactacaggaaagcggggaca
gtcatgtttgagtttgggatgcgcctcggccgggaggttcggactcgactcggtctgcag
aaacaggtgaactgctacctcgccgcgctcaactgtctgcgcctcatcaggcctgaatac
gcctggatcgtccaaccggtgtccgggagcacatacgagcggcccggagcgtctccgaag
aggaactcggacggagagtttccagcagagccagctgcaggtaggcgacaggtggacatc
ctggagctccacgacctggagaaggagtacttcctgtcccgcgctcgcctcacgctggct
cagcaccacccgccgtcggcagccatcgcaggcaccgcgtctgcacccgagctggttctg
ctcctggtccaaactggactcttcgacgctgctctgtctctcagtcgcatcttcaaactg
aatctgagtcccatcttcgacgccctgaccttcaaatgcatccagctgcagtccgggggg
gaggagcctcagagtgaagcttggagctggttggctgctaaccagctctctgtcgttaac
actaaggagtccagtgccacagatgaggcctggcggctgctggcctcctacctggacagg
tatccctccaccaatgggcagcatcaccgccacgtcatccacaagctgctgtcgcacggt
gtgccgctgcctgattggctactgcagtcctacaagcgtgtggacgctccctcactgcta
cgtctcctgctgaactttgacctcttagaaacagccgcagagctcgtgttggagtacgtg
gacgccgtcctaggccgtggacatcagtactttgggattgagaggccgctctctgccatg
tctccgcccgcctggctaccgtacaccgcgatcgatcagcttctgcacgccttgagcgag
acacaaacgcacagcaaccttcacatcaaagttcgagacaaactggacgagtatcacaac
gtggtgcagcagacgaccgaacaccgactcgcctctcagagacgagtggcagcgtga
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