Poecilia reticulata (guppy): 103466456
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Entry
103466456 CDS
T05149
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103466456 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103466456 (myo5c)
04131 Membrane trafficking [BR:
pret04131
]
103466456 (myo5c)
03029 Mitochondrial biogenesis [BR:
pret03029
]
103466456 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pret04812
]
103466456 (myo5c)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103466456 (myo5c)
mRNA cycle factors
P-body specific factors
103466456 (myo5c)
Membrane trafficking [BR:
pret04131
]
Others
Actin-binding proteins
Myosins
103466456 (myo5c)
Mitochondrial biogenesis [BR:
pret03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103466456 (myo5c)
Cytoskeleton proteins [BR:
pret04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103466456 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
Csm1_N
AAA_16
YqgF
Motif
Other DBs
NCBI-GeneID:
103466456
NCBI-ProteinID:
XP_008410243
LinkDB
All DBs
Position
LG6:complement(26792371..26812380)
Genome browser
AA seq
1740 aa
AA seq
DB search
MALSELYTKYNRVWIPDEEQVWKSAEITRDFHSGDDVLELLLEDGTVRLHPVDPSKPKLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPVYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSQTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCADSAEFKHLRLLSADEFRYTGMGGDITIDGVN
DRKDFEETRQTFFLLGLKEDFQSDVFKVLAAILHLGNVEIRSSGDDKSSAPLSDSHLAAF
CDLLCVSAAELVRWLCNRRIVLVAETVVKPVPKERAAAGRDALAKQIYAHLFDCIISRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLEANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDTMRASKFSFLAHFFQEEEPSRAT
SKGIKVKSARPSVKPANKQLRTSVGDKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSGRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHVEADFNDKKQTCKNV
LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSRKRKYLRIR
EAAVILQQYIRGKRTIRKTVTAETLKRGWAAVVIQRYWRGYRMRQIYHAVQMASITIQAF
TRGWMTRKRYKKMMEEHKALVLQKYAKAWLARRRFQTMRRLVLNVQLSYRVQQLRKKSEE
QNKENRALMERLTSLASSHSQTMEKLHSQEAQLEKLTTLKASLEEREKKAREEASMTINQ
LQRRFEELNTEKQNLEKKLEVSIKKTKESFDQVKRSLLEEKENEVRLRKIAENNTDIQRH
DHEKELETLKEELKRLKEDRVSLQRKVEDGAQVCSDLQEQVIQLTKHVKVIPELRRDLNN
LQNQKDNLDRKMKEESEQTRAKTKEIIRQLLGGFIEEEKLLGLVPEDSEKIYELDDVQEA
FESLQKATRLLENHQKEQRETYESQMEGLTLRVEHLQNENGKLQNLFQEKSNINEDIRQE
VSRLSSENSVIPELKLQVSELHRQKQELETVVREQNSELAEKNMEISNILHKKITEESSQ
RRHFEEKAKELEEIREELQVRIEELEEENEHLKRQQLMEGEVKTKLREETSQLTAENMDL
EEQLDQKDRWIKKLHSQIKCLEMSQKAKQAPALPKEYLGMLEYKREDEARLIQNIITDLK
PKGVVVNVIPTLPAFILFMCVRHADYLNDDNKLKSLMNGIIQGVKKVVLAHHKDFESLSF
WLSNTYQLLNCLKQYSGEEQFLKQSTPRQKKNCLQNFDLSEHRQILSDLAIQIYHQLISV
MQKTLTPAIVPGMLEHESLQGISSMKPTGFRKRSSSLYNDSETYTISSILQELSVFYSAM
SHHGMEQSLTKQAVKQLFFLIGATTFNQIMLRKDMCSCRKGMQIRCNISYLEEWLKENGL
QSCGAIDTLRPLAQAAWLLQVNKSTDEDAKEIAEKCTELNPVQIVKILNSYTPIDDFEKR
VTSSFVRQVQSFLQEYEGATQLMLDTDYRFQVTFPFYPSSTALESLQVPSSLHLEFLTRI
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggctttatctgaactgtacacaaagtataacagagtgtggataccagatgaagaacaa
gtatggaaatcggctgaaatcactagagacttccactcgggcgatgatgttcttgaatta
ctcctcgaagacggaactgttcgcctccacccggttgacccctccaagcccaagctgccc
cctctcagaaacccagacatcttggtaggggagaacgacctcacggctctcagctacctg
catgaacctgcggtcctgcacaacctcaaagtccgatttgtcgagtccagaatcatctac
acctactgtggtatcattctggtcgctgtaaatccgtataaacagcttcctgtctatgga
gacgctatcattcatgcttattcaggccagaacatgggagacatggatcctcatatattt
gctgtggcggaggaggcgtacaaacagatggccaggaaccataaaaaccagtccatcatt
gtgagcggggaatctggagcgggtaaaaccgtctcggcccgttacgctatgaggtacttt
gctgttgtgagcaaatctggaagtcagactcgggttgaagacaaagtgctggcttccaat
ccgatcacagaggcaattggaaatgcaaaaaccacccgaaacgacaacagcagccggttt
gggaaatacacagagatcagctttgacaggcggtatcgcatcatcggagcgaacatgagg
acttacctcttagagaagtccagggtggtttttcaggcagaaaatgagcgtaattaccac
atattctaccagatgtgttcgtgtgcagactctgcagagtttaagcacctgagactgttg
agtgccgatgagttcaggtacaccggcatgggtggcgacataaccatcgatggtgtgaat
gacaggaaggactttgaagagactcgacagaccttcttccttctgggtttgaaagaggac
ttccagtcagacgtttttaaagttttagctgcaattttgcatttggggaatgtggagatc
agaagctctggggacgacaagtcatcagctcctctgagcgattcacacctggcggcgttc
tgtgacctgctgtgcgtgagcgcggctgagctggtgcgatggctgtgcaatcgccggatc
gttctggtggctgagacggtggtgaagccggttcctaaagagcgagcggcggccggcaga
gacgctctggctaagcagatctacgcacacctgtttgactgcatcatcagcaggatcaac
acggcgctgcaggttcctgggaaacaacacgctttcatcggcgttctggacatctacgga
tttgaaacgttcgacatcaacagttttgagcagttttgtatcaactatgcaaacgaaaag
ctccagcagcagtttaacttgcatgtgttcaaactggagcaggaggagtacatgaaggag
gacatcccttggacgctgatagacttttatgataatcagcctgtcatcgacctgattgaa
gcaaagatggggatcctcgacttgctcgatgaagaatgcttatttcctcagggaacagac
cagagctggctgcagaagctgttcaactacctggaagccaatcctttgtttgagaagccc
aggttatcaaatgaggcctttgtgattcaacactttgcagacaaggttgaatatcagtgc
cgaggttttcttgagaagaatcgagatgctctttatgaagagctggtagacacgatgaga
gccagcaagttttcctttctggcacattttttccaagaggaggagccgagcagagcaacc
agtaaaggcatcaaagttaaatcagccaggccttcggtgaaaccagccaacaagcagctg
aggacctcagtgggagataagtttcgcagctccttgtctttactgatggaaacgctgaac
gccaccacccctcactatgtgcgctgcataaagcccaacgatgaaaaactcccatttgaa
tacgactcggggcgagtggtgcagcagctgcgggcctgcggagtgcttgagactattcgg
atcagtgcacagagctacccgtccaggtggacgtacatcgagttttacagccgatacagc
atcctgatgtcacacgtggaggcagatttcaacgacaagaaacaaacctgcaaaaatgtc
ctgcagagattgattcaggactccaaccagtacaagtttggccgtacaaagatcttcttc
cgcgccggacaggtagcttacctggagaagctgcgtctggatcgactgagaggagcctgc
gtgacgattcagaaacacgtccgtggatggagccgcaagaggaaatacctgaggatacga
gaggcggccgtcatcctgcagcagtacatccgagggaagaggacgatccgtaaaacggtg
accgctgaaaccctgaagcggggctgggctgctgtggtgatccagagatactggagaggt
taccgcatgagacagatctaccatgccgtccagatggcctccatcaccatccaggccttc
accagaggatggatgaccaggaaacgctacaagaagatgatggaggagcacaaagctctg
gttctgcagaaatatgccaaagcatggctggcccggcggcgttttcaaaccatgcgccgc
cttgtgctcaatgtgcagctctcctaccgggtgcagcagctcaggaagaagagtgaagag
cagaacaaagagaatcgagcattaatggagagactgacgagtctggccagcagccattcc
caaacgatggagaaactccacagtcaggaggcgcagctggaaaaactaacgaccctgaag
gcatcactggaggaaagagaaaagaaagcaagagaagaggcgagcatgacaattaatcag
cttcaaaggcgatttgaagaactaaacactgaaaagcagaacttggagaaaaagcttgaa
gtttccatcaagaaaaccaaagaaagttttgatcaagtaaaaagaagcctcctggaagag
aaagagaatgaagttcggcttagaaagattgcagagaacaacactgacatccagagacac
gaccacgagaaggagctggaaaccctgaaggaggagctaaagagactgaaggaggacaga
gtgagtctccagaggaaggttgaggacggggcgcaggtgtgctctgacctgcaggaacag
gtcattcagctcaccaagcatgtgaaggtcatcccggagctgcgcagagatctgaacaac
ctgcagaatcagaaggacaacctggaccgtaagatgaaggaagagtcggagcaaacaaga
gctaaaacgaaggaaattataagacagctgcttggcggttttattgaagaggaaaagctt
ttggggcttgttccagaagactctgagaagatttatgaactggatgatgtgcaggaagcc
tttgagagtctgcaaaaagccaccaggttactggaaaaccaccagaaggagcagagggag
acgtacgagtctcagatggagggcctgactctgagagtggagcaccttcagaacgagaac
ggaaaactgcaaaatcttttccaggaaaaaagtaacatcaacgaggatattcggcaggaa
gtgtcgaggctgagcagtgagaactcggtgataccggagctgaagctgcaggtttcagag
ctgcacagacaaaagcaggagctggagacggttgttagggagcagaacagcgagttggca
gaaaaaaatatggagatcagcaacattctccacaagaagatcacagaagaaagctcccag
cgcagacattttgaggagaaagccaaggagctggaggagatcagagaggagctccaagtg
aggatagaggagctggaggaggagaacgaacatttgaagaggcagcagctgatggagggc
gaagtgaagacaaaactgagagaggagacgtcgcagttaacagctgagaacatggacttg
gaggagcagcttgaccagaaagatcgctggattaagaaactccacagtcaaataaagtgc
cttgaaatgtcacagaaagcaaaacaagctcctgctcttcctaaagaatatcttggcatg
ttggagtataagagggaggatgaagcaaggctcattcaaaacatcataactgacctgaag
cccaaaggtgtggtggtcaatgtgattcccactctcccagccttcatcctcttcatgtgc
gtccgccatgccgactacctgaacgacgacaacaaactgaagtctttgatgaatgggatc
atccaaggggtcaaaaaggtcgtcctggctcaccacaaagactttgagtcattgtccttc
tggctctccaacacataccagctgctcaactgtctgaaacaatacagcggggaggaacag
ttcctgaagcagagtacgccgcgccagaagaagaactgcctgcagaacttcgatctgtcc
gaacacagacagatcctcagcgacctggccatacaaatctaccatcagctcatctccgtc
atgcagaagacgctcacacctgctattgttcctggtatgctggagcatgagagcttacag
gggatctctagcatgaaaccgaccggcttcaggaagcggtccagcagcttgtataacgac
tcggagacgtacaccatctcctccatcctgcaggaactctctgttttttattccgccatg
agccaccacggcatggagcagagcctgaccaagcaggccgtcaaacagctcttctttctg
atcggagccaccaccttcaaccaaatcatgctccgcaaagacatgtgctcctgcaggaaa
gggatgcagatcaggtgtaacatcagctacctggaggagtggctgaaggagaacgggctg
cagagctgcggcgccatcgacacgctgcggcctctggctcaggccgcctggctgctgcag
gtcaacaaatccaccgacgaagacgccaaggaaatcgcagaaaagtgcaccgaactcaac
cctgttcagattgtcaagattctgaactcctacacacccatcgatgattttgagaaacga
gtgacatcatcgtttgttcgccaagttcagtccttccttcaggaatacgaaggcgccaca
cagctgatgctggacacagattatcgcttccaggtgacgtttcccttctatccgtcttca
acggcgttggagtctctgcaggttcccagcagccttcatctggagttcctaaccaggatc
tga
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integrated database retrieval system
