Poecilia reticulata (guppy): 103466524
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Entry
103466524 CDS
T05149
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103466524 (ighmbp2)
03012 Translation factors [BR:
pret03012
]
103466524 (ighmbp2)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103466524 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
103466524 (ighmbp2)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Other ribosome biogenesis factors
103466524 (ighmbp2)
Translation factors [BR:
pret03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103466524 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
DEAD
Viral_helicase1
ResIII
AAA_16
Helicase_RecD
nSTAND3
UvrD-helicase
AAA_22
IstB_IS21
Flavi_DEAD
PhoH
SRP54
SLFN-g3_helicase
Zot
AAA
AAA_25
UvrD_C
HEM4
ATPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103466524
NCBI-ProteinID:
XP_008410378
UniProt:
A0A3P9P4H2
LinkDB
All DBs
Position
LG6:complement(25902786..25909917)
Genome browser
AA seq
982 aa
AA seq
DB search
MAVEKFVSKTLELLQEEREAEIEETKIWQENISLKDLQNKGVCLLKLQIGSQSTGLYGRT
VIVLEPRKHLGFSSLPSNSFGPGDIVGIYDPSGCIAASQICTGIVTRISQASISVAFDDL
KDGASFDSDGLYNLLKLANDVTYKRMKRALNALNGYRTGPASSLIHVLFGDAQPSSHSQS
NGFEFFNSELDDSQREAVSFALSQRELAVVHGPPGTGKTTTVVEIILQAVKQGQKVLCCA
PSNVAVDNLVERLARCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIADIRKDIDK
ALVGMKKKSEKGERGNFKREIGELRKELKNRETAAIAEILKSADVVLSTNTGACDDGPLK
FLPAEHFDWVVIDECAQALESSCWIALLRVRKCILAGDYKQLPPTIKSQTAAAKGLSLSL
MERIIETHGDSVVRMLTVQYRMNSAIMEWASKEMYHGRLTAHSSVEKHLLKDLPGVACVE
ETSTPLLLIDTAGCGLNEREMADEQSKGNQGEVDIVSLHIKSLTEAGVKAKDIAVIAPYN
LQVDLLRQKLSARHPGMEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRHIAVVCDTQTVGNHAFLKSLVDHMIEVGEVRTAFEYLQDIVPQNYTRDHKDTKTST
SSTSSKQKNRDQAPGKAKEGQKMTSNSTDNTAGSQNHTKSQTSAQKDQKDNKSRYAEIRL
QVENFMKDVNMKDLQFPSSFNSHDRLLVHQIAEELGLVHESRGEGGGRCITVSRPVASEP
VEEPTQEETQEEEPAPALQSEPPPSHQPSVDLKTLHLERMRREQQKREENVQQKKQQNCN
PAAQGTKKSKGKNKMKAGACDIAAAAVPDDDFDALISAVVKADSVCSFVKCKASVLTLGQ
LCIFCNRQFCLSHHIPEVHGCGDKAKSHARMRISKEGVLYAGSGKKDKSLDPNKKVYLQR
KLDSKLKDMASQRKPKNKETDT
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggagaaatttgtgtccaagactctggagcttctacaggaggagcgagaggct
gaaatagaggaaaccaagatatggcaggagaacatttccttgaaggatcttcagaataaa
ggagtttgcctgctgaagcttcagatagggagtcagtccaccggcctgtacggtcgcacc
gtcatcgttttagagcccaggaagcatctcggtttctcctcccttccgagcaacagcttt
gggccaggcgatattgttggcatatatgacccttctgggtgcattgcagcctcacagatc
tgcacaggaatagtaacaaggatcagccaagcttctatcagtgtggcctttgatgacctg
aaggatggagccagctttgattcagatggtctttataatctcttgaagctggccaatgat
gttacctacaaacggatgaaacgggccttgaatgcattaaatggctacagaaccggacca
gcttccagtctgatacatgttctctttggagacgcgcagccttcttctcactcacagtca
aatggctttgagttctttaattccgaattggacgattcccagagagaagctgtatccttc
gctctttcacagagagagctggctgtggttcatggacctccaggcacaggaaaaaccacc
acagtggtggagatcatcctgcaagctgtgaaacaaggccagaaggtcctgtgttgtgcc
ccctcaaatgttgccgttgataatttagtggagaggcttgctcgctgtaaagccaaagtc
ctgagactgggccaccccgccagactgctggaatccatccagaaacactcactggacgcc
atcctcgctcagagcgacaacgcaaacatcatcgccgacatccggaaagacatcgacaaa
gcactggtggggatgaagaagaaaagcgaaaaaggagagcgaggaaactttaaacgtgaa
ataggagagctgaggaaagagctgaaaaacagggagacggcagccatcgctgagatcctg
aagagtgctgatgtcgtgttgtccacaaacaccggtgcatgtgacgacggtcctctgaag
ttcctgccggcagagcattttgattgggtggtgatcgatgagtgtgcgcaggccctggag
agcagctgctggatcgctttactcagagtgcgcaaatgcatcctggctggagactacaag
cagttaccaccaaccatcaaatcacaaacagctgcagctaaaggcctgtccctgagtctc
atggagaggattattgagacgcatggagactcggtggtccgtatgttaacagttcagtac
cgcatgaacagtgctatcatggaatgggcctccaaagagatgtaccatggacgattaacc
gctcacagttccgtggagaaacatttattgaaagatctgccgggcgttgcctgcgtcgaa
gagaccagcacgccacttcttctgatcgacaccgcagggtgtggcctgaacgaaagggag
atggcagacgagcagtccaaagggaaccaaggtgaggtcgacattgtttcactgcatata
aagagcctgacggaagccggagtaaaggctaaagacattgccgttatcgctccgtataat
ctccaagttgatcttctgcgtcagaagctttctgcacgtcacccagggatggaaataaag
tctgtggacggatttcagggcagagaaaaggaagctgttgtgctgtcgttagttcgctcc
aacagaaaaggtgaggtgggttttcttgcagaggacagacggataaatgtcgccgtcaca
cgcgcaagacgtcacatcgccgtagtgtgcgacacgcagacagttgggaatcacgctttc
cttaaatctctggtcgatcacatgatcgaggtcggtgaggtcagaactgcattcgagtac
ctgcaagatatcgtgccgcagaactacacccgtgatcacaaagacacaaagaccagcact
tcctccacatctagcaagcagaagaacagagatcaggctccaggtaaagcaaaggaaggc
cagaaaatgaccagcaactctacggacaacacagctggttcacagaatcacacaaagtcc
caaacatcagcccagaaagaccaaaaagacaacaagagccgatacgctgagatcagactg
caagtggagaatttcatgaaggatgtaaatatgaaggatttacagttcccatcatccttc
aactcccacgatcgcctgctggtccaccagatcgctgaggagctgggcctcgttcatgag
agcagaggagagggcggcggcagatgcatcaccgtctcccggcccgtggcatcggagcct
gtcgaggagccgacgcaggaggaaacccaagaggaggagcctgctcctgctctgcagagt
gagccgccaccatcccaccaaccttcagtagatctgaagacgttgcatctggagaggatg
cgaagggagcagcagaagagggaggaaaacgtccagcaaaagaagcaacagaactgcaac
cctgcagctcagggaacaaagaagtctaaaggaaagaacaaaatgaaggcaggggcctgt
gacatcgctgctgccgccgttccagatgatgactttgatgctctcatcagcgctgtcgtg
aaggcagacagtgtttgcagttttgtgaaatgcaaagcgtctgtgttgacactcggccag
ctttgcatcttctgcaaccggcagttctgtctcagtcatcacataccggaggttcatggc
tgtggcgataaggcaaagtctcacgctcggatgagaataagcaaagagggggttctttat
gccgggagtgggaagaaagacaaatcgttggaccctaataagaaagtgtacctacaaaga
aaactggactctaagctgaaagatatggcatcacaaaggaaaccaaagaacaaggagacg
gacacttaa
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