Poecilia reticulata (guppy): 103466527
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Entry
103466527 CDS
T05149
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03420
Nucleotide excision repair
pret04115
p53 signaling pathway
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103466527 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
103466527 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
103466527 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103466527 (ddb2)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103466527 (ddb2)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103466527 (ddb2)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103466527 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
103466527
NCBI-ProteinID:
XP_008410384
UniProt:
A0A3P9P3R3
LinkDB
All DBs
Position
LG6:25877766..25883739
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AA seq
490 aa
AA seq
DB search
MKSEPTKSQANGSKSKVKKGAAEDTSLSKKLRDKIDGETSNAGPSHSSAGVQRKNGPGSI
LHYIYKSSLGQSLRSQMRQCLQEPFVRSLSSYHFHGASSPFDRRITCLEWHPTHPTTVAA
ASKGGDIFLWDFEKSETKSFTRGNGAGDFIGEMKFCPTDFSRIYAASGEGTLTLHSFEGH
TPTLLSRTQDCGHDHHSVCFWYCCVDVSVSRQMLVTGDNMGELLLVGLDGKKIFSSKLHK
AKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKTSFLYEMPHERAVNSAYFNPLDAT
KLLTTDQHDQIRVYSSSDWSKPQHIIQHPHRQFQHLTPIKATWHPLYDLIVAGRYPDDRI
CTGDQRTIDVFDSNSGELVFQMYDSTASGIKSINKFSPMGDVIGSGMGVTLLIWDHDESL
VSGRHKPIEETSASADGVRGQRRGQQRSGRDRRGSTRDAKLKKKLASMEETETKTKTGCT
KQKQTRKRKL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgagcccaccaagtcacaggcaaatggatcaaaaagtaaagtgaagaaagga
gctgcggaagacacgtcgctgagtaaaaaactgcgagacaagatagatggagaaacatct
aacgcggggccttctcacagttctgcaggagtccagaggaagaatggccctgggagtatc
ctgcactatatatacaagagttctttgggccagagtctccgctctcagatgagacagtgt
ctccaggagccgtttgttcgatctctgtcttcctaccattttcatggcgccagcagtcca
tttgatcgcagaatcacctgcttggagtggcaccccactcatcccaccactgtggctgca
gcctcaaaagggggggacatttttctgtgggactttgagaagtctgaaacgaaaagcttt
actcgagggaacggagcgggagacttcattggcgagatgaagttttgccccacagacttc
tccagaatttatgcggcttctggcgaggggacattgaccctgcatagctttgagggccac
actcccaccctgctgtccagaacgcaagactgcggtcatgatcaccacagtgtttgcttt
tggtactgctgtgtcgacgtgtctgtgagtcggcagatgcttgtgactggggacaacatg
ggagagcttctgcttgtgggtctggatgggaaaaagattttcagcagtaagttgcacaaa
gccaaagtgacgcatgcagagtttaactcccgatgcgactggttgctggcgacggcctcg
gttgatcacacggtgaagctctgggacctgaggaacatcaaggacaagacgagcttcctc
tacgaaatgcctcacgagagagctgtcaactcagcctatttcaaccctttggacgccacc
aagctgctcacaacagatcagcacgaccagatccgggtgtactcctcctctgattggtcg
aagcctcagcacatcattcagcacccacacaggcagtttcagcacctcacacccatcaag
gccacctggcatcccctgtacgacctgattgtggcgggccgataccctgatgaccgcatc
tgcaccggagatcagaggaccattgacgtctttgactccaacagtggggagttggtgttt
cagatgtatgattccacggcctcagggatcaaatctatcaacaagttcagtccaatgggt
gacgtcatcggatctggaatgggcgtgacgctactgatctgggaccacgacgagtcgctg
gtcagcggccgacacaaaccgatcgaggaaacgtcggcttcagcggacggggtcagaggt
cagcggaggggtcagcagcgctctggcagagaccggaggggttcgaccagggatgctaag
ctgaagaaaaagctagcttctatggaagaaaccgagaccaaaaccaaaaccgggtgcacc
aaacaaaaacaaactcggaagaggaaactgtag
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