Poecilia reticulata (guppy): 103466592
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Entry
103466592 CDS
T05149
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103466592 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pret03310
]
103466592 (rora)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103466592 (rora)
Nuclear receptors [BR:
pret03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
103466592 (rora)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103466592
NCBI-ProteinID:
XP_008410497
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Position
LG6:24433503..24644321
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRKQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaagcagacctgctcaagcaccaacagaggtatctcggtaacaaagaagacacac
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgcgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcgtactcctgcccccgtcagaaaaactgcttgatcgaccgcaccagccgcaaccgc
tgccagcactgcaggctgcagaagtgcctggcagtgggaatgtcacgagatgcggtgaag
tttggccgcatgtcaaagaagcagcgagatagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgagaccaccaacagcagcccggagaggcagagccgctcacaccc
agctacggcctctcagccaacggcctaacggagctacacgatgacctcagcggctacatg
gacggccacactcctgatggcagcaagcccgactcggcggtcagcagcttctacctagac
atccagccgtcccctgaccagtcgggcttagacatcaacggcatcaagccggagcccatc
tgcgactttgcccccggctctggcttctttccctactgctccttcaccaacggcgagacc
tcccccaccgtttccatggctgaactagagcacctcgcccagaacatctcaaagtcacac
atggagacatgtcagtacctgagagaggagctgcagcagatgacctggcaggctttcctt
caggaagaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctctggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctatttcgatggaaaa
tacgctggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctct
gcttttgtgttgatgtctgctgaccgatcctggcttcaggagaaggtgaaagtggaaaaa
ctccagcagaagatccaactggcccttcaacatgttctgcagaagaaccacagagaggat
ggcattcttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagctcacggctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatataaggagctgttcggatcagactttgagcagtccatgcccgtcgatgggtaa
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