Poecilia reticulata (guppy): 103466796
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Entry
103466796 CDS
T05149
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03030
DNA replication
pret03410
Base excision repair
pret03420
Nucleotide excision repair
pret03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103466796 (rfc1)
03410 Base excision repair
103466796 (rfc1)
03420 Nucleotide excision repair
103466796 (rfc1)
03430 Mismatch repair
103466796 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pret03032
]
103466796 (rfc1)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103466796 (rfc1)
DNA replication proteins [BR:
pret03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103466796 (rfc1)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103466796 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
AAA_30
AAA_17
RuvB_N
Rad17
AAA_5
AAA_16
AAA_14
AAA_33
AAA_18
BRCT_2
nSTAND3
AAA_7
NTPase_1
RNA_helicase
AAA_19
Motif
Other DBs
NCBI-GeneID:
103466796
NCBI-ProteinID:
XP_008410872
LinkDB
All DBs
Position
LG1:complement(19238550..19249819)
Genome browser
AA seq
1168 aa
AA seq
DB search
MDIRRFFGPVSGKPAPNVDRKPDEKKKKKSSSEDDVKKRKKESAKVKSSKNEEQHKSSEK
KRKKRQVIESDSDEEEPVMKAKKSSKEKAATSKAKPPPRKDPVQYVSETDSDNDNFQSLK
KASKSKQNGANKKSEEDSCSPKAKERVKSPAKPPLSRGKTERKSPKVPTTPKLAPPPQPK
QTPTSVLDYFGSGEIHRSDKKLVASTKRKAPTQELDDLISDEELARQLQMEEDTEVEKQV
HEDEEFARTLALLDTEPQPKKARKNSEERPSPTTTPKKSSASVPSKTSRTAPEDVISPSP
KKSPTAGRASSKLAMMKKRDEAKDEGAKSKAPASPRKNKTSPKKEPRASSISDMKFTPKA
GTTPTALKTSPKKPESTSTSPDDAEKKKMHTLAFRNYLNRDGPRALGSKDIPEGAENCLE
GCVFVLTGVLESMERDDAKALIERHGGKVTGNVSKKTNYLVQGRDSGASKLDKAESLGTT
ILDEDGLLELIRTKPGKKSKYEIAAETECKASNTRTPPSRTSKVTPKAQKISPSKGNSRS
PQTPSPSKTGQAHRARASGGSTPTGRGSRQTARRELGLPSASSSSSAPGPSPPSPQGDAA
GLLWVDKYRPRSLKAVIGQQGEQSCANKLLRWLQNWHRHHSRGADKPAASRFGKFGGGKD
DGSGYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSI
ENFYKGTSQTVSSRHVLIMDEVDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHQKI
RSLANYCFDLRFQRPRVEQIKGAMMSLAYKEGIKIPPPALNEIILASNQDVRQVIHNLSM
WSAKDKVMTYDRCKSDAASARKDTKLGPFDVCRKVFASGEETAHMSLIDKSDLFFHDYSL
APLFVQENYPHVRPAAARGDMKSHLVLLSKTADSIANGDLVDRRIRSSQNWSLLPTQAIF
ASVLPGELMRGYMSQFPAFPSWLGKNSSTNKHSRIVQELTSHMSLKTLSSRQAVNLDYMH
YLRHALLHPLQRHGTEGAAQAVQLLDDYQLLKEDVDSIMEISVWGGQPDPYSKLDPKVKA
AFTRAYNKEVHLTPYSLQAVKKGRRGGGADLDEGDEGPDDQESGDEAEGLKADAMIKQKK
TKTTKESTKEKKQESGKGKGKGKGKAKK
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaggcggttctttggaccggtatcaggcaagcctgccccaaatgtagaccga
aaaccagacgagaagaagaaaaagaagagttcttcagaagatgatgtgaaaaagaggaag
aaggagagcgctaaggtcaaaagctccaaaaatgaagagcaacacaaaagcagcgagaag
aaaagaaagaaacgccaagttatagaatcggattcagacgaggaagagccggtgatgaag
gctaagaaatcctccaaagagaaagctgcgaccagcaaagcaaagccgcctcctaggaag
gatcctgtgcagtacgtctctgaaacagactcggacaatgacaacttccagagtctgaag
aaggcctccaagtccaaacagaacggcgctaacaaaaagtcagaagaagacagctgcagt
cctaaagccaaagagcgagtcaagtctcctgctaagcctcctttgagtcgggggaaaacc
gagagaaagagtcccaaagttcctacaacccctaaactagcccctccccctcagcctaag
caaactcccacctctgttctcgactacttcggcagcggagagattcaccgctcggacaag
aagctggtggccagcaccaagcgaaaggctccgactcaagagttagacgacctgataagc
gacgaggaattggcccggcagctgcagatggaggaggacacggaggtggagaaacaagtc
catgaggacgaggagtttgccagaacgttggccctgctggacaccgagccacagcccaaa
aaagcgcgcaaaaactctgaggaaaggccaagtccaaccacgacccccaagaagagcagc
gcgagcgtcccgtcgaagaccagtcggaccgctccggaggacgtcatcagtccgtcgccc
aagaagagccccactgccggcagagccagctccaagctggccatgatgaagaaacgggac
gaggcgaaggacgaaggcgcgaaaagcaaagcgcccgcttcaccgaggaaaaacaaaact
tctccgaaaaaagagccgcgtgcttcttccatttcggacatgaagttcacgcccaaagca
ggaacgacaccgacggcgctgaagacgtctcccaagaagcccgagagcacaagtacaagt
cctgacgatgcggagaagaagaagatgcacacgctagctttcaggaattacctcaacaga
gacggaccgcgggcgctgggatccaaggacatccccgagggagcagagaactgtttggag
gggtgtgtgtttgtgctgaccggagtcctggagtcgatggagagagacgacgccaaagct
ctcattgagcgtcacggaggcaaagtgacgggaaacgtcagcaagaagaccaactacctg
gtgcagggcagagacagcggagcgtccaaactggacaaggctgagagtttaggcaccacc
atcctggatgaggacggcttgttggagctgatcaggaccaaaccaggaaagaagtcaaag
tatgagatcgctgcagaaaccgagtgcaaagcctcaaacaccagaactcctccgagtcgg
acctcaaaggtcacccccaaggctcagaagatctccccctccaaggggaactccaggtcc
ccccagaccccgagcccctcaaagacgggccaggcacacagagccagagccagcggcggc
agcaccccaactgggaggggctccagacagacggcccggagggagctgggccttccctcc
gcatcctcctcttcctcagctcctggaccctcccctccttcccctcagggggacgctgcc
ggtctcctgtgggtggacaagtaccgtccacgttccctgaaggctgtgatcggccagcag
ggggagcagagctgtgccaacaagctgctccgctggctgcagaactggcacaggcaccac
agcagaggagcggacaaacccgcagcgtcgaggtttggtaaatttggaggagggaaggac
gacggatcgggatacaaagccgctctgctgtctgggcctccaggggtggggaagacgacc
acagctgccctggtctgtgaggagctgggcttcagctacgtggagatgaacgccagctgc
actcgcagcaaaaacagcctgaaggaagtcgtggcggagtcgctcaacaacaccagcatc
gagaacttctacaaagggacgtctcagacggtgagcagcaggcacgtcctcatcatggac
gaggtggacggcatggcgggaaatgaggaccgaggaggaatccaggagatgatcggcctg
atcaaaaactcaaagattcccatcatctgcatgtgcaacgaccgcaaccaccagaagatc
agatcgttggccaattactgcttcgacctgcgcttccagaggccgcgggtggagcagatc
aagggagccatgatgtctcttgcttataaagagggaatcaagatccctcctccggctctc
aatgaaatcatcttggcctccaaccaggacgtgcgacaggtgattcacaacctgagcatg
tggtcggccaaagacaaggtgatgacgtacgaccggtgcaagtccgacgcggccagcgcc
cgcaaggacacgaagctggggccgttcgacgtctgcaggaaggtgttcgcctcgggcgag
gagacggcccacatgagcctcatcgacaagtccgacctcttcttccacgactactctctg
gcgccgctcttcgtccaggagaactacccgcacgtccgtccggctgcggctcgtggagac
atgaagtcccacctggtgctgctcagtaagaccgccgactccatcgccaacggcgacctg
gtggacagaaggatccgatcgagtcagaactggtccctgcttcccactcaggccatcttt
gccagcgtgttgccgggcgagctcatgagaggatacatgtctcagttccccgccttcccc
agctggctgggcaagaactcctccaccaacaaacattcccgcatcgtgcaggagctgacc
tcacacatgagcttaaagaccctgagcagcagacaggcggtcaacctggactacatgcat
tacctgcgccatgcgctgctgcatccgctgcagaggcacgggacagagggagcggcgcag
gccgtgcagctgctggacgactaccagctcctcaaggaggacgtggacagcatcatggag
atcagtgtgtggggcgggcagcctgacccctactccaaactggaccccaaggtgaaggca
gctttcacgcgggcgtacaacaaggaggtccacctgacgccatattccctccaagctgta
aagaagggccgccgaggaggaggagcggatctggacgaaggagacgaaggtccggacgac
caggagtctggggacgaagccgagggcctcaaagcagacgccatgatcaaacagaagaag
accaaaacaactaaagagtcgacgaaggagaagaagcaagaatccgggaagggcaaaggc
aaggggaaaggcaaagcaaagaaatga
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integrated database retrieval system
